RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 CLPPQ16740 277 aaPredicted RBP8.63□□□□□ -1.03
THBS3-201ENST00000368378 PTCHD3Q3KNS1 767 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 UBE2R2Q712K3 238 aaPredicted RBP8.63□□□□□ -1.03
THBS3-201ENST00000368378 P2RY8Q86VZ1 359 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 DCP2Q8IU60 420 aaKnown RBP8.63□□□□□ -1.03
THBS3-201ENST00000368378 ZNF548Q8NEK5 533 aaPredicted RBP8.63□□□□□ -1.03
THBS3-201ENST00000368378 SORCS1Q8WY21 1168 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 TRIB3Q96RU7 358 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 NEURL2Q9BR09 285 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 BEX2Q9BXY8 128 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 ASPSCR1Q9BZE9 553 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 ACPTQ9BZG2 426 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 IL26Q9NPH9 171 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 DNAJB9Q9UBS3 223 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 SLC6A14Q9UN76 642 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 DRGXA6NNA5 263 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 EVPLLA8MZ36 301 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 CBFA2T3O75081 653 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 BMP4P12644 408 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 HOXB8P17481 243 aaPredicted RBP8.63□□□□□ -1.03
THBS3-201ENST00000368378 PREPP48147 710 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 PCYT1AP49585 367 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 CLCN7P51798 805 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 CREMQ03060 361 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 BCL2L1Q07817 233 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 MED22Q15528 200 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 TAB1Q15750 504 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 USP39Q53GS9 565 aaKnown RBP8.63□□□□□ -1.03
THBS3-201ENST00000368378 XKR7Q5GH72 579 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 HECTD3Q5T447 861 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 LRRC66Q68CR7 880 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 SLC24A5Q71RS6 500 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 ADAMTSL2Q86TH1 951 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 COLGALT2Q8IYK4 626 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 CADM3Q8N126 398 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 FAM83FQ8NEG4 500 aaPredicted RBP8.63□□□□□ -1.03
THBS3-201ENST00000368378 FBXO22Q8NEZ5 403 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 BPIFB1Q8TDL5 484 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 SOCS4Q8WXH5 440 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 TADA1Q96BN2 335 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 FUBP3Q96I24 572 aaKnown RBP eCLIP8.63□□□□□ -1.03
THBS3-201ENST00000368378 Q96MT0 163 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 IL4I1Q96RQ9 567 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 COPS8Q99627 209 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 PRRG3Q9BZD7 231 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 PDFQ9HBH1 243 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 DDX28Q9NUL7 540 aaKnown RBP8.63□□□□□ -1.03
THBS3-201ENST00000368378 FNIP2Q9P278 1114 aa8.63□□□□□ -1.03
THBS3-201ENST00000368378 CACNA1CQ13936 2221 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 A0A0G2JN53 185 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 GLYATL1P3A0A0U1RQE8 302 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 FAM92AA1XBS5 289 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 J3KTA2 159 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 FPGTO14772 594 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 STC2O76061 302 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 EPOP01588 193 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 HIST1H2AGP0C0S8 130 aaPredicted RBP8.62□□□□□ -1.03
THBS3-201ENST00000368378 PORP16435 677 aaPredicted RBP8.62□□□□□ -1.03
THBS3-201ENST00000368378 HIST1H2ADP20671 130 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 ITGALP20701 1170 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 HNF1BP35680 557 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 SLC19A1P41440 591 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 MAPKAPK2P49137 400 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 TGM4P49221 684 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 HSD17B7P56937 341 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 OLIG3Q7RTU3 272 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 B3GNT8Q7Z7M8 397 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 HIPK1Q86Z02 1210 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 MCFD2Q8NI22 146 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 LINC01599Q8WXQ3 324 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 TBC1D20Q96BZ9 403 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 MYO19Q96H55 970 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 HIST1H2AHQ96KK5 128 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 ZNF382Q96SR6 550 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 HIST1H2AJQ99878 128 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 RBM4BQ9BQ04 359 aaKnown RBP8.62□□□□□ -1.03
THBS3-201ENST00000368378 MGME1Q9BQP7 344 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 H2AFJQ9BTM1 129 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 RBM4Q9BWF3 364 aaKnown RBP8.62□□□□□ -1.03
THBS3-201ENST00000368378 POPDC3Q9HBV1 291 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 TRIM39Q9HCM9 518 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 RAD18Q9NS91 495 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 ZIM2Q9NZV7 527 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 ERGIC3Q9Y282 383 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 ALPK2Q86TB3 2170 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 VWA8A3KMH1 1905 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 SSX4O60224 188 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 MTRF1O75570 445 aaKnown RBP8.62□□□□□ -1.03
THBS3-201ENST00000368378 SOX14O95416 240 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 DAPP51397 102 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 CDH12P55289 794 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 RPS26P62854 115 aaKnown RBP8.62□□□□□ -1.03
THBS3-201ENST00000368378 FOXM1Q08050 763 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 SMARCB1Q12824 385 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 CHIT1Q13231 466 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 STARD3Q14849 445 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 INAVAQ3KP66 663 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 ATP13A5Q4VNC0 1218 aa8.62□□□□□ -1.03
THBS3-201ENST00000368378 PDCD4Q53EL6 469 aaKnown RBP8.62□□□□□ -1.03
THBS3-201ENST00000368378 PRSS36Q5K4E3 855 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms