RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 TMEM44Q2T9K0 475 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 C4orf46Q504U0 113 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 NCBP2-AS2Q69YL0 99 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 ARSKQ6UWY0 536 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 CRYBG2Q8N1P7 616 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 CFAP52Q8N1V2 620 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 OR10Q1Q8NGQ4 319 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 SETD6Q8TBK2 473 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 GTF2H4Q92759 462 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 MGME1Q9BQP7 344 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 UQCC2Q9BRT2 126 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 SGK2Q9HBY8 427 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 GIMAP2Q9UG22 337 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 CHD2O14647 1828 aaKnown RBP11.96□□□□□ -0.49
SHPRH-202ENST00000367503 RIMBP3CA6NJZ7 1639 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 RIMBP3BA6NNM3 1639 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 RIMBP3Q9UFD9 1639 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 A0A1W2PQ67 120 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 TTC34A8MYJ7 566 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 SMIM18P0DKX4 95 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 HSD17B1P14061 328 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 PVALBP20472 110 aaPredicted RBP11.96□□□□□ -0.49
SHPRH-202ENST00000367503 TARDBPQ13148 414 aaKnown RBP eCLIP11.96□□□□□ -0.49
SHPRH-202ENST00000367503 MSANTD2Q6P1R3 559 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 RPS27LQ71UM5 84 aaKnown RBP11.96□□□□□ -0.49
SHPRH-202ENST00000367503 LMO3Q8TAP4 145 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 PPP1R13LQ8WUF5 828 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 ASB15Q8WXK1 588 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 RFT1Q96AA3 541 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 ELAC1Q9H777 363 aaKnown RBP11.96□□□□□ -0.49
SHPRH-202ENST00000367503 MEAF6Q9HAF1 191 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 ATRNL1Q5VV63 1379 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 SLC19A2O60779 497 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 FGBP02675 491 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 GANABQ14697 944 aaKnown RBP11.96□□□□□ -0.49
SHPRH-202ENST00000367503 FNDC3BQ53EP0 1204 aaKnown RBP11.96□□□□□ -0.49
SHPRH-202ENST00000367503 NCEH1Q6PIU2 408 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 ACDQ96AP0 544 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 MS4A12Q9NXJ0 267 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 KIAA1522Q9P206 1035 aaPredicted RBP11.96□□□□□ -0.49
SHPRH-202ENST00000367503 FKBP7Q9Y680 259 aa11.96□□□□□ -0.49
SHPRH-202ENST00000367503 AFDNP55196 1824 aaKnown RBP11.96□□□□□ -0.49
SHPRH-202ENST00000367503 SNED1Q8TER0 1413 aa11.96□□□□□ -0.5
SHPRH-202ENST00000367503 SPAM1P38567 509 aa11.96□□□□□ -0.5
SHPRH-202ENST00000367503 FNTBP49356 437 aa11.96□□□□□ -0.5
SHPRH-202ENST00000367503 NFE2L1Q14494 772 aa11.96□□□□□ -0.5
SHPRH-202ENST00000367503 DPY19L1Q2PZI1 675 aa11.96□□□□□ -0.5
SHPRH-202ENST00000367503 SLC36A3Q495N2 470 aa11.96□□□□□ -0.5
SHPRH-202ENST00000367503 FAM76BQ5HYJ3 339 aa11.96□□□□□ -0.5
SHPRH-202ENST00000367503 OAFQ86UD1 273 aa11.96□□□□□ -0.5
SHPRH-202ENST00000367503 TXNDC5Q8NBS9 432 aaKnown RBP11.96□□□□□ -0.5
SHPRH-202ENST00000367503 TRIM43Q96BQ3 446 aaPredicted RBP11.96□□□□□ -0.5
SHPRH-202ENST00000367503 IFT27Q9BW83 186 aa11.96□□□□□ -0.5
SHPRH-202ENST00000367503 RC3H2Q9HBD1 1191 aaKnown RBP11.96□□□□□ -0.5
SHPRH-202ENST00000367503 BEX1Q9HBH7 125 aa11.96□□□□□ -0.5
SHPRH-202ENST00000367503 TRPS1Q9UHF7 1281 aa11.96□□□□□ -0.5
SHPRH-202ENST00000367503 PIK3C2AO00443 1686 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 BHMG1C9JSJ3 638 aaPredicted RBP11.95□□□□□ -0.5
SHPRH-202ENST00000367503 ITPKAP23677 461 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 GADD45AP24522 165 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 RPL4P36578 427 aaKnown RBP11.95□□□□□ -0.5
SHPRH-202ENST00000367503 CD47Q08722 323 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 C1QTNF12Q5T7M4 302 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 CES5AQ6NT32 575 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 PRSS48Q7RTY5 328 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 ZDHHC14Q8IZN3 488 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 OR6C4Q8NGE1 309 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 RHOXF1Q8NHV9 184 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 CCDC107Q8WV48 283 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 COL26A1Q96A83 441 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 MMP28Q9H239 520 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 NUDT15Q9NV35 164 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 IL37Q9NZH6 218 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 NDUFAF4Q9P032 175 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 FAM208AQ9UK61 1670 aaKnown RBP11.95□□□□□ -0.5
SHPRH-202ENST00000367503 MEIOCA2RUB1 952 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 MYBPHLA2RUH7 354 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 ERAL1O75616 437 aaKnown RBP11.95□□□□□ -0.5
SHPRH-202ENST00000367503 ARHGEF15O94989 841 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 C1RP00736 705 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 LMO2P25791 158 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 MAN2A2P49641 1150 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 ZNHIT3Q15649 155 aaPredicted RBP11.95□□□□□ -0.5
SHPRH-202ENST00000367503 ZBTB6Q15916 424 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 SOWAHAQ2M3V2 549 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 RAET1GQ6H3X3 334 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 HSH2DQ96JZ2 352 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 C12orf66Q96MD2 445 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 TMED9Q9BVK6 235 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 GLS2Q9UI32 602 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 IFT172Q9UG01 1749 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 CLIC1O00299 241 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 INSIG1O15503 277 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 RFPL3O75679 317 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 TOXO94900 526 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 ANXA4P09525 319 aaPredicted RBP11.95□□□□□ -0.5
SHPRH-202ENST00000367503 FAM163BP0C2L3 166 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 RORAP35398 523 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 CLCN4P51793 760 aa11.95□□□□□ -0.5
SHPRH-202ENST00000367503 ABHD18Q0P651 414 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms