RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 SEMA4BQ9NPR2 832 aaPredicted RBP12.77□□□□□ -0.37
SQSTM1-201ENST00000360718 TM7SF3Q9NS93 570 aa12.77□□□□□ -0.37
SQSTM1-201ENST00000360718 ZNHIT2Q9UHR6 403 aa12.77□□□□□ -0.37
SQSTM1-201ENST00000360718 CYP8B1Q9UNU6 501 aa12.77□□□□□ -0.37
SQSTM1-201ENST00000360718 DNMT3AQ9Y6K1 912 aaPredicted RBP12.77□□□□□ -0.37
SQSTM1-201ENST00000360718 GON4LQ3T8J9 2241 aa12.77□□□□□ -0.37
SQSTM1-201ENST00000360718 CEP192Q8TEP8 1941 aa12.77□□□□□ -0.37
SQSTM1-201ENST00000360718 A0A1W2PP18 115 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 POM121BA6NF01 834 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 H0Y8X5 98 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 GFYI3L273 518 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 FPGTO14772 594 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 KMOO15229 486 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 CATP04040 527 aaKnown RBP12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 LINC00032P0C843 101 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 UMPSP11172 480 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 CAPN3P20807 821 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 SLC6A2P23975 617 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 PDHA2P29803 388 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 OXTRP30559 389 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 SLC5A2P31639 672 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 MRPL19P49406 292 aaKnown RBP12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 CLDN2P57739 230 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 RBBP7Q16576 425 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 PLA2G4EQ3MJ16 856 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 TMTC4Q5T4D3 741 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 METTL2BQ6P1Q9 378 aaKnown RBP12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 TTC33Q6PID6 262 aaPredicted RBP12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 LPCAT2Q7L5N7 544 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 FAM47BQ8NA70 645 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 TRPV3Q8NET8 790 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 OR56A4Q8NGH8 313 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 LZICQ8WZA0 190 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 NECAB3Q96P71 396 aaPredicted RBP12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 C6orf106Q9H6K1 298 aaPredicted RBP12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 RMI1Q9H9A7 625 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 AGPAT4Q9NRZ5 378 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 TMEM45AQ9NWC5 275 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 CIDEBQ9UHD4 219 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 POLG2Q9UHN1 485 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 EIF2B4Q9UI10 523 aaKnown RBP12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 PCTPQ9UKL6 214 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 PDE10AQ9Y233 779 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 ANGPTL3Q9Y5C1 460 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 SAC3D1A6NKF1 404 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 PPP6CO00743 305 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 IGLV3-19P01714 112 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 MYF6P23409 242 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 HNMTP50135 292 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 MERTKQ12866 999 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 NFYCQ13952 458 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 MBOAT1Q6ZNC8 495 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 CBR4Q8N4T8 237 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 PJA1Q8NG27 643 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 RHBDF1Q96CC6 855 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 NSUN5Q96P11 429 aaKnown RBP12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 APOOQ9BUR5 198 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 CMTM6Q9NX76 183 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 OPTCQ9UBM4 332 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 SLC23A2Q9UGH3 650 aa12.76□□□□□ -0.37
SQSTM1-201ENST00000360718 E2F3O00716 465 aa12.75□□□□□ -0.37
SQSTM1-201ENST00000360718 ZNF217O75362 1048 aa12.75□□□□□ -0.37
SQSTM1-201ENST00000360718 DCNP07585 359 aaKnown RBP12.75□□□□□ -0.37
SQSTM1-201ENST00000360718 HNRNPA2B1P22626 353 aaKnown RBP12.75□□□□□ -0.37
SQSTM1-201ENST00000360718 ARL1P40616 181 aaPredicted RBP12.75□□□□□ -0.37
SQSTM1-201ENST00000360718 HSPA7P48741 367 aa12.75□□□□□ -0.37
SQSTM1-201ENST00000360718 FOXA1P55317 472 aa12.75□□□□□ -0.37
SQSTM1-201ENST00000360718 RPA4Q13156 261 aa12.75□□□□□ -0.37
SQSTM1-201ENST00000360718 TPRG1LQ5T0D9 272 aa12.75□□□□□ -0.37
SQSTM1-201ENST00000360718 TTC23LQ6PF05 361 aa12.75□□□□□ -0.37
SQSTM1-201ENST00000360718 TOE1Q96GM8 510 aaKnown RBP12.75□□□□□ -0.37
SQSTM1-201ENST00000360718 CD244Q9BZW8 370 aa12.75□□□□□ -0.37
SQSTM1-201ENST00000360718 DPEP2Q9H4A9 486 aa12.75□□□□□ -0.37
SQSTM1-201ENST00000360718 EGFL7Q9UHF1 273 aa12.75□□□□□ -0.37
SQSTM1-201ENST00000360718 PCDHA9Q9Y5H5 950 aa12.75□□□□□ -0.37
SQSTM1-201ENST00000360718 GPR45Q9Y5Y3 372 aa12.75□□□□□ -0.37
SQSTM1-201ENST00000360718 ARPC2O15144 300 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 PSIP1O75475 530 aaKnown RBP12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 NPPAP01160 153 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 IGHV4-34P06331 123 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 UROSP10746 265 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 KELP23276 732 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 AKT2P31751 481 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 PIK3CGP48736 1102 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 NUP107P57740 925 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 EEFSECP57772 596 aaKnown RBP12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 MTAPQ13126 283 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 DCTN2Q13561 401 aaKnown RBP12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 GTF2H2Q13888 395 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 ATP6AP1Q15904 470 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 GTF2H2CQ6P1K8 395 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 FAM83HQ6ZRV2 1179 aaPredicted RBP12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 GPR141Q7Z602 305 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 TBC1D21Q8IYX1 336 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 UBTD2Q8WUN7 234 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 ITFG2Q969R8 447 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 CLDN23Q96B33 292 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 ADI1Q9BV57 179 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 CHRDQ9H2X0 955 aa12.74□□□□□ -0.37
SQSTM1-201ENST00000360718 TUBB1Q9H4B7 451 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms