RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 TMEM199Q8N511 208 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 PAPD5Q8NDF8 572 aaKnown RBP7.14□□□□□ -1.27
CLCN3-202ENST00000360642 VPS33AQ96AX1 596 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 PPWD1Q96BP3 646 aaKnown RBP7.14□□□□□ -1.27
CLCN3-202ENST00000360642 ACOX2Q99424 681 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 TMEM79Q9BSE2 394 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 VN1R3Q9BXE9 311 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 MRPL9Q9BYD2 267 aaKnown RBP7.14□□□□□ -1.27
CLCN3-202ENST00000360642 MUC13Q9H3R2 512 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 PTTG2Q9NZH5 202 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 IL17CQ9P0M4 197 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 MKL2Q9ULH7 1088 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 FADS2P1A8MWK0 482 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 PLOD2O00469 737 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 STX7O15400 261 aaKnown RBP7.14□□□□□ -1.27
CLCN3-202ENST00000360642 SLC22A3O75751 556 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 PRAMEF12O95522 483 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 NPPAP01160 153 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 RPL17P18621 184 aaKnown RBP7.14□□□□□ -1.27
CLCN3-202ENST00000360642 IL12AP29459 219 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 OXTRP30559 389 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 OR1D2P34982 312 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 CCT8P50990 548 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 KCNK10P57789 538 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 ERVPABLB-1P60509 514 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 AARS2Q5JTZ9 985 aaKnown RBP7.14□□□□□ -1.27
CLCN3-202ENST00000360642 C6orf136Q5SQH8 315 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 FAM43BQ6ZT52 329 aaPredicted RBP7.14□□□□□ -1.27
CLCN3-202ENST00000360642 GPRIN3Q6ZVF9 776 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 CPNE9Q8IYJ1 553 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 KIAA2013Q8IYS2 634 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 FAM26EQ8N5C1 309 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 PROKR1Q8TCW9 393 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 ESAMQ96AP7 390 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 ISG20Q96AZ6 181 aaKnown RBP7.14□□□□□ -1.27
CLCN3-202ENST00000360642 NMD3Q96D46 503 aaKnown RBP7.14□□□□□ -1.27
CLCN3-202ENST00000360642 SACM1LQ9NTJ5 587 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 SLAMF8Q9P0V8 285 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 HSFX1Q9UBD0 423 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 EIF2B4Q9UI10 523 aaKnown RBP7.14□□□□□ -1.27
CLCN3-202ENST00000360642 DHRS7Q9Y394 339 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 OR51B4Q9Y5P0 310 aa7.14□□□□□ -1.27
CLCN3-202ENST00000360642 ARHGAP10A1A4S6 786 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 TYW5A2RUC4 315 aaKnown RBP7.13□□□□□ -1.27
CLCN3-202ENST00000360642 TBKBP1A7MCY6 615 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 H7BY64 318 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 ACOX3O15254 700 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 TSPAN3O60637 253 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 SNAP91O60641 907 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 OR4F21O95013 312 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 CHEK2O96017 543 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 C1RP00736 705 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 GPIP06744 558 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 ZNF23P17027 643 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 IL10P22301 178 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 PSMA4P25789 261 aaKnown RBP7.13□□□□□ -1.27
CLCN3-202ENST00000360642 HMGCLP35914 325 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 ALDH3B2P48448 385 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 GSK3BP49841 420 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 POLR2JP52435 117 aaKnown RBP7.13□□□□□ -1.27
CLCN3-202ENST00000360642 CACNG1Q06432 222 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 SPIDRQ14159 915 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 LAPTM4AQ15012 233 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 NR0B2Q15466 257 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 RBBP7Q16576 425 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 ZRANB3Q5FWF4 1079 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 RABL3Q5HYI8 236 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 LINGO4Q6UY18 593 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 CAMK1DQ8IU85 385 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 TRPV3Q8NET8 790 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 TSPAN14Q8NG11 270 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 OR52B6Q8NGF0 335 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 DNAJB14Q8TBM8 379 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 MAGEE1Q9HCI5 957 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 PNPLA3Q9NST1 481 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 NUDT4Q9NZJ9 180 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 DNMT3BQ9UBC3 853 aaKnown RBP7.13□□□□□ -1.27
CLCN3-202ENST00000360642 X6R8D5 127 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 TRBV23OR9-2A0A075B6M9 112 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 C2orf78A6NCI8 922 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 TRIM64A6NGJ6 449 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 IQCF5A8MTL0 148 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 SPATA31D3P0C874 917 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 FPR1P21462 350 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 AGFG1P52594 562 aaKnown RBP7.13□□□□□ -1.27
CLCN3-202ENST00000360642 EEFSECP57772 596 aaKnown RBP7.13□□□□□ -1.27
CLCN3-202ENST00000360642 EMX2Q04743 252 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 BFSP2Q13515 415 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 NFYCQ13952 458 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 STARD3Q14849 445 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 RBBP5Q15291 538 aaKnown RBP7.13□□□□□ -1.27
CLCN3-202ENST00000360642 ATP6AP1Q15904 470 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 NANOGP8Q6NSW7 305 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 SCIMPQ6UWF3 145 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 SBSNQ6UWP8 590 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 B3GNT6Q6ZMB0 384 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 ZNF574Q6ZN55 896 aaPredicted RBP7.13□□□□□ -1.27
CLCN3-202ENST00000360642 SPATA31D4Q6ZUB0 917 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 SPRED1Q7Z699 444 aa7.13□□□□□ -1.27
CLCN3-202ENST00000360642 ZFAND4Q86XD8 727 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms