RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 SPAG4Q9NPE6 437 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 TIMMDC1Q9NPL8 285 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 ZIM2Q9NZV7 527 aa13.45□□□□□ -0.26
CSNK1E-201ENST00000359867 K7ESM1 405 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 TSPAN6O43657 245 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 MTX2O75431 263 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 TRMUO75648 421 aaKnown RBP13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 CDH2P19022 906 aaPredicted RBP13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 MAPK9P45984 424 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 CREB5Q02930 508 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 EMX2Q04743 252 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 CAMK2BQ13554 666 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 TRIM25Q14258 630 aaKnown RBP13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 FGL2Q14314 439 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 HMBOX1Q6NT76 420 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 PRMT9Q6P2P2 845 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 SCIMPQ6UWF3 145 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 USP30Q70CQ3 517 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 NLRP8Q86W28 1048 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 ASB9Q96DX5 294 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 SUCOQ9UBS9 1254 aaKnown RBP13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 INVSQ9Y283 1065 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 A0A1W2PQU0 124 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 ARHGAP10A1A4S6 786 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 C9JVG2 144 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 SLC28A1O00337 649 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 NR5A2O00482 541 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 ANGPT2O15123 496 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 PAK4O96013 591 aaPredicted RBP13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 GDF5P43026 501 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 HSPA13P48723 471 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 PRLHRP49683 370 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 DIO3P55073 304 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 TMEM115Q12893 351 aaPredicted RBP13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 KRT80Q6KB66 452 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 PATL1Q86TB9 770 aaKnown RBP13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 VRK3Q8IV63 474 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 SFRP1Q8N474 314 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 DCBLD1Q8N8Z6 715 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 FNDC5Q8NAU1 212 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 NUS1Q96E22 293 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 PPP3R2Q96LZ3 170 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 MYOCQ99972 504 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 SLC52A3Q9NQ40 469 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 ITM2CQ9NQX7 267 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 GID8Q9NWU2 228 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 USP36Q9P275 1121 aaKnown RBP13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 TMEM181Q9P2C4 612 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 FZD4Q9ULV1 537 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 GON4LQ3T8J9 2241 aa13.44□□□□□ -0.26
CSNK1E-201ENST00000359867 DYTNA2CJ06 578 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 SAC3D1A6NKF1 404 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 RNGTTO60942 597 aaKnown RBP13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 SLC22A3O75751 556 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 HTR6P50406 440 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 TRAP1Q12931 704 aaKnown RBP13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 SAMD4BQ5PRF9 694 aaKnown RBP13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 TSSK4Q6SA08 328 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 TMEM126BQ8IUX1 230 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 MINDY1Q8N5J2 469 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 RASGEF1AQ8N9B8 481 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 SKA2Q8WVK7 121 aaPredicted RBP13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 CCM2Q9BSQ5 444 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 BTBD1Q9H0C5 482 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 FZD3Q9NPG1 666 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 SELENONQ9NZV5 590 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 CNOT6Q9ULM6 557 aaKnown RBP13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 PIKFYVEQ9Y2I7 2098 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 A0A1W2PP18 115 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 RGS14O43566 566 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 CLDN9O95484 217 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 C7P10643 843 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 CAPN3P20807 821 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 SOX11P35716 441 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 CXCL12P48061 93 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 SLC6A12P48065 614 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 KCNK10P57789 538 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 DPTQ07507 201 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 FOXM1Q08050 763 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 MAD2L1Q13257 205 aaPredicted RBP13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 RCAN2Q14206 197 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 SPATS1Q496A3 300 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 TRIM46Q7Z4K8 759 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 GLMNQ92990 594 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 SLC45A3Q96JT2 553 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 MAGEB10Q96LZ2 347 aaPredicted RBP13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 GPATCH1Q9BRR8 931 aaKnown RBP13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 ZCCHC2Q9C0B9 1178 aaKnown RBP13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 MAP10Q9P2G4 905 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 CD300AQ9UGN4 299 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 DNAH14Q0VDD8 3507 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 FAM234BA2RU67 622 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 FAM149AA5PLN7 773 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 OR2AG2A6NM03 316 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 INPP4BO15327 924 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 TPST1O60507 370 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 ULK1O75385 1050 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 APBB3O95704 486 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 GSTM1P09488 218 aa13.43□□□□□ -0.26
CSNK1E-201ENST00000359867 ABRAXAS2Q15018 415 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 200.6 ms