RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 PRAMEF13Q5VWM6 474 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 LRRC69Q6ZNQ3 347 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 SLAIN1Q8ND83 568 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 RAB2BQ8WUD1 216 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 THEM6Q8WUY1 208 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 PKP4Q99569 1192 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 NUP50Q9UKX7 468 aa17.94■□□□□ 0.46
SHANK1-202ENST00000359082 SLC35F4A4IF30 521 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 IMPDH1P20839 514 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 FAM182AQ5T1J6 154 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 PAQR3Q6TCH7 311 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 TDRPQ86YL5 185 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 CCM2Q9BSQ5 444 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 LRRC3Q9BY71 257 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 CYTH4Q9UIA0 394 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 ZNF541Q9H0D2 1346 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 E7EQ34 232 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 SCDO00767 359 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 TM4SF1P30408 202 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 DCAKDQ8WVC6 231 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 ZCCHC3Q9NUD5 404 aaKnown RBP17.93■□□□□ 0.46
SHANK1-202ENST00000359082 SPATA7Q9P0W8 599 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 VPS29Q9UBQ0 182 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 ERI3O43414 337 aaKnown RBP17.93■□□□□ 0.46
SHANK1-202ENST00000359082 DNAJA1P31689 397 aaKnown RBP17.93■□□□□ 0.46
SHANK1-202ENST00000359082 DHPSP49366 369 aaPredicted RBP17.93■□□□□ 0.46
SHANK1-202ENST00000359082 RIN1Q13671 783 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 AUTS2Q8WXX7 1259 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 MIPEPQ99797 713 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 MOV10Q9HCE1 1003 aaKnown RBP17.93■□□□□ 0.46
SHANK1-202ENST00000359082 KLRF1Q9NZS2 232 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 MROH1Q8NDA8 1641 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 SLC33A1O00400 549 aaPredicted RBP17.93■□□□□ 0.46
SHANK1-202ENST00000359082 APLP1P51693 650 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 CMTR2Q8IYT2 770 aaKnown RBP17.93■□□□□ 0.46
SHANK1-202ENST00000359082 MND1Q9BWT6 205 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 TAC3Q9UHF0 121 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 GNG8Q9UK08 70 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 HAS3O00219 553 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 CH25HO95992 272 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 AGXTP21549 392 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 TSTQ16762 297 aaKnown RBP17.93■□□□□ 0.46
SHANK1-202ENST00000359082 PDCD4Q53EL6 469 aaKnown RBP17.93■□□□□ 0.46
SHANK1-202ENST00000359082 KIAA0930Q6ICG6 404 aaPredicted RBP17.93■□□□□ 0.46
SHANK1-202ENST00000359082 TOMM5Q8N4H5 51 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 LSM14AQ8ND56 463 aaKnown RBP17.93■□□□□ 0.46
SHANK1-202ENST00000359082 TSTD1Q8NFU3 115 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 TRIM43Q96BQ3 446 aaPredicted RBP17.93■□□□□ 0.46
SHANK1-202ENST00000359082 ZNF358Q9NW07 568 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 ZDHHC3Q9NYG2 299 aa17.93■□□□□ 0.46
SHANK1-202ENST00000359082 EOMESO95936 686 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 SRCP12931 536 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 ZNF12P17014 697 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 HSD17B2P37059 387 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 OCLNQ16625 522 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 DEFB119Q8N690 84 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 PLA2G15Q8NCC3 412 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 OR52E4Q8NGH9 312 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 TM9SF2Q99805 663 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 NOCTQ9UK39 431 aaKnown RBP17.92■□□□□ 0.46
SHANK1-202ENST00000359082 DUXAA6NLW8 204 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 GRXCR1A8MXD5 290 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 DNM1LO00429 736 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 RPL19P84098 196 aaKnown RBP17.92■□□□□ 0.46
SHANK1-202ENST00000359082 CBLBQ13191 982 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 RFTN1Q14699 578 aaPredicted RBP17.92■□□□□ 0.46
SHANK1-202ENST00000359082 TMEM198Q66K66 360 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 DNAJB8Q8NHS0 232 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 GRPEL2Q8TAA5 225 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 SCLYQ96I15 445 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 SUV39H2Q9H5I1 410 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 AKTIPQ9H8T0 292 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 TNFRSF10DQ9UBN6 386 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 ALG5Q9Y673 324 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 PPEF2O14830 753 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 ZNF16P17020 682 aaPredicted RBP17.92■□□□□ 0.46
SHANK1-202ENST00000359082 S100A2P29034 98 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 CD83Q01151 205 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 ARL9Q6T311 187 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 TMEM209Q96SK2 561 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 STOX2Q9P2F5 926 aaPredicted RBP17.92■□□□□ 0.46
SHANK1-202ENST00000359082 ATRNO75882 1429 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 TCRBV7S3A2A0A539 114 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 SOWAHBA6NEL2 793 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 NEMP2A6NFY4 417 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 ARPC2O15144 300 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 TRAPPC6AO75865 159 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 ARPC4P59998 168 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 ARSJQ5FYB0 599 aaPredicted RBP17.92■□□□□ 0.46
SHANK1-202ENST00000359082 LRRC58Q96CX6 371 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 B3GAT2Q9NPZ5 323 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 FLRT1Q9NZU1 646 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 FARSAQ9Y285 508 aaKnown RBP17.92■□□□□ 0.46
SHANK1-202ENST00000359082 SIX3O95343 332 aaPredicted RBP17.92■□□□□ 0.46
SHANK1-202ENST00000359082 H6PDO95479 791 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 CSNK2A2P19784 350 aaPredicted RBP17.92■□□□□ 0.46
SHANK1-202ENST00000359082 DSC3Q14574 896 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 JAGN1Q8N5M9 183 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 ZNF670-ZNF695F2Z2N8 137 aa17.92■□□□□ 0.46
SHANK1-202ENST00000359082 KAT7O95251 611 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms