RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 MED27Q6P2C8 311 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 LONP2Q86WA8 852 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 SNX32Q86XE0 403 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 RNF175Q8N4F7 328 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 ABHD11Q8NFV4 315 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 OR9I1Q8NGQ6 314 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 OR2A1Q8NGT9 310 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 RP9Q8TA86 221 aaKnown RBP16.45■□□□□ 0.22
TPM1-205ENST00000357980 PATE1Q8WXA2 126 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 SH3KBP1Q96B97 665 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 TWSG1Q9GZX9 223 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 SPNS1Q9H2V7 528 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 TAS2R1Q9NYW7 299 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 OR6C2Q9NZP2 312 aa16.45■□□□□ 0.22
TPM1-205ENST00000357980 TRBV23OR9-2A0A075B6M9 112 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 LOC100653049A0A140TA62 436 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 BCAT2O15382 392 aaPredicted RBP16.44■□□□□ 0.22
TPM1-205ENST00000357980 KRT34O76011 436 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 RSL1D1O76021 490 aaKnown RBP16.44■□□□□ 0.22
TPM1-205ENST00000357980 THRAP10827 490 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 PEBP1P30086 187 aaKnown RBP16.44■□□□□ 0.22
TPM1-205ENST00000357980 SHMT2P34897 504 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 AFF3P51826 1226 aaKnown RBP16.44■□□□□ 0.22
TPM1-205ENST00000357980 MNAT1P51948 309 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 UBE2IP63279 158 aaKnown RBP16.44■□□□□ 0.22
TPM1-205ENST00000357980 GRIK2Q13002 908 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 C1orf61Q13536 156 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 KIAA0040Q15053 153 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 PAGE2BQ5JRK9 111 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 C10orf62Q5T681 223 aaPredicted RBP16.44■□□□□ 0.22
TPM1-205ENST00000357980 ZFAND4Q86XD8 727 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 FUNDC1Q8IVP5 155 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 C1orf210Q8IVY1 113 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 NAGSQ8N159 534 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 MIER2Q8N344 545 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 RBM15BQ8NDT2 890 aaKnown RBP16.44■□□□□ 0.22
TPM1-205ENST00000357980 ZFPM2Q8WW38 1151 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 MTERF1Q99551 399 aaKnown RBP16.44■□□□□ 0.22
TPM1-205ENST00000357980 BTBD10Q9BSF8 475 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 PELI2Q9HAT8 420 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 BRF2Q9HAW0 419 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 LRTM1Q9HBL6 345 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 POT1Q9NUX5 634 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 CUEDC1Q9NWM3 386 aaPredicted RBP16.44■□□□□ 0.22
TPM1-205ENST00000357980 C1orf109Q9NX04 203 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 NOP53Q9NZM5 478 aaKnown RBP16.44■□□□□ 0.22
TPM1-205ENST00000357980 PCDHB11Q9Y5F2 797 aa16.44■□□□□ 0.22
TPM1-205ENST00000357980 KIR2DS5A0A0G2JLQ3 304 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 A0A0G2JNG1 304 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 OR5K4A6NMS3 321 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 B2RBV5 119 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 KIR2DS3K7RE56 304 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 HSD3B1P14060 373 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 HSD3B2P26439 372 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 CPOXP36551 454 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 CSNK1EP49674 416 aaKnown RBP16.43■□□□□ 0.22
TPM1-205ENST00000357980 RPL38P63173 70 aaKnown RBP16.43■□□□□ 0.22
TPM1-205ENST00000357980 KCNJ2P63252 427 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 MEF2AQ02078 507 aaPredicted RBP16.43■□□□□ 0.22
TPM1-205ENST00000357980 PRDX1Q06830 199 aaKnown RBP16.43■□□□□ 0.22
TPM1-205ENST00000357980 LAPTM5Q13571 262 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 CYLC2Q14093 348 aaPredicted RBP16.43■□□□□ 0.22
TPM1-205ENST00000357980 KIR2DS5Q14953 304 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 AGKQ53H12 422 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 ICE2Q659A1 982 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 PAOXQ6QHF9 649 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 GK5Q6ZS86 529 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 AMIGO1Q86WK6 493 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 SFTPA2Q8IWL1 248 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 TMEM105Q8N8V8 129 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 HUS1BQ8NHY5 278 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 LCN9Q8WX39 176 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 JPH3Q8WXH2 748 aaPredicted RBP16.43■□□□□ 0.22
TPM1-205ENST00000357980 REPS1Q96D71 796 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 C1orf21Q9H246 121 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 ASIC5Q9NY37 505 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 CCDC167Q9P0B6 97 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 CPNE7Q9UBL6 633 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 TSC22D4Q9Y3Q8 395 aa16.43■□□□□ 0.22
TPM1-205ENST00000357980 IGKV1-8A0A0C4DH67 115 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 CFAP73A6NFT4 308 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 SLC2A4P14672 509 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 GPR18Q14330 331 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 PDCD4Q53EL6 469 aaKnown RBP16.42■□□□□ 0.22
TPM1-205ENST00000357980 PMS2CLQ68D20 193 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 ZNF740Q8NDX6 193 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 OR4K1Q8NGD4 311 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 SLC37A2Q8TED4 501 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 GAB3Q8WWW8 586 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 CMTM7Q96FZ5 175 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 RTKNQ9BST9 563 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 TBC1D10AQ9BXI6 508 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 SPHK1Q9NYA1 384 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 POLR3HQ9Y535 204 aaPredicted RBP16.42■□□□□ 0.22
TPM1-205ENST00000357980 SDK1Q7Z5N4 2213 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 MAGEB17A8MXT2 336 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 SEC22BO75396 215 aa16.42■□□□□ 0.22
TPM1-205ENST00000357980 CHRM5P08912 532 aaPredicted RBP16.42■□□□□ 0.22
TPM1-205ENST00000357980 CSTF1Q05048 431 aaKnown RBP16.42■□□□□ 0.22
TPM1-205ENST00000357980 SRSF5Q13243 272 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms