RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 AMIGO1Q86WK6 493 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 OR2A1Q8NGT9 310 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 ZFPM2Q8WW38 1151 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 SH3KBP1Q96B97 665 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 KLHL29Q96CT2 875 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 CMTM5Q96DZ9 223 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 CATSPER2Q96P56 530 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 TWSG1Q9GZX9 223 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 LRMDAQ9H2I8 198 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 SPNS1Q9H2V7 528 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 EHD1Q9H4M9 534 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 C11orf16Q9NQ32 467 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 SUSD2Q9UGT4 822 aa17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 ZNF490Q9ULM2 529 aaPredicted RBP17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 COPG1Q9Y678 874 aaKnown RBP17.5■□□□□ 0.39
SMARCD3-202ENST00000356800 LMO7DNF2Z398 122 aa17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 KDM1AO60341 852 aa17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 ULK1O75385 1050 aa17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 PDYNP01213 254 aa17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 C1GALT1C1LP0DN25 315 aa17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 SLC2A4P14672 509 aa17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 HNF4AP41235 474 aa17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 ATP4BP51164 291 aa17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 NEK2P51955 445 aa17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 IRX1P78414 480 aaPredicted RBP17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 NAA25Q14CX7 972 aa17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 OGFOD2Q6N063 350 aa17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 SYT12Q8IV01 421 aa17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 ADGRF3Q8IZF5 1079 aa17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 TUBGCP3Q96CW5 907 aa17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 MTFMTQ96DP5 389 aaKnown RBP17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 MARK4Q96L34 752 aa17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 PCBD2Q9H0N5 130 aa17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 RIC8BQ9NVN3 520 aa17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 CUEDC1Q9NWM3 386 aaPredicted RBP17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 GEMIN8Q9NWZ8 242 aaKnown RBP17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 OR6C2Q9NZP2 312 aa17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 G3BP2Q9UN86 482 aaKnown RBP17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 SNX6Q9UNH7 406 aa17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 CABIN1Q9Y6J0 2220 aa17.49■□□□□ 0.39
SMARCD3-202ENST00000356800 BTN3A3O00478 584 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 NOBOXO60393 691 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 KRT6AP02538 564 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 KRT6BP04259 564 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 CHRM5P08912 532 aaPredicted RBP17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 LBPP18428 481 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 PTPN4P29074 926 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 KRT6CP48668 564 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 MAZP56270 477 aaKnown RBP17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 MEF2AQ02078 507 aaPredicted RBP17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 BNIP3Q12983 259 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 DEFB133Q30KQ1 61 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 FRG2Q64ET8 278 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 ICE2Q659A1 982 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 ADNP2Q6IQ32 1131 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 TRIM46Q7Z4K8 759 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 C17orf64Q86WR6 236 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 WDR20Q8TBZ3 569 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 FRG2BQ96QU4 278 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 SRMSQ9H3Y6 488 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 FSCN3Q9NQT6 498 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 DOLKQ9UPQ8 538 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 CFAP73A6NFT4 308 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 H0YIV9 168 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 PEX11AO75192 247 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 ALDOCP09972 364 aaKnown RBP17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 MNAT1P51948 309 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 SIM2Q14190 667 aaPredicted RBP17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 SLBPQ14493 270 aaKnown RBP eCLIP17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 SQLEQ14534 574 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 PLCL1Q15111 1095 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 SLC9B2Q86UD5 537 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 FAM129CQ86XR2 697 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 FAM20CQ8IXL6 584 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 SDR16C5Q8N3Y7 309 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 SLC25A45Q8N413 288 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 RNF175Q8N4F7 328 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 ZNF740Q8NDX6 193 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 ABHD11Q8NFV4 315 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 SELENOMQ8WWX9 145 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 ELF4Q99607 663 aaPredicted RBP17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 ELOVL6Q9H5J4 265 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 PCDHB11Q9Y5F2 797 aa17.48■□□□□ 0.39
SMARCD3-202ENST00000356800 IGKV1-8A0A0C4DH67 115 aa17.47■□□□□ 0.39
SMARCD3-202ENST00000356800 LSM1O15116 133 aaKnown RBP17.47■□□□□ 0.39
SMARCD3-202ENST00000356800 PIK3R1P27986 724 aa17.47■□□□□ 0.39
SMARCD3-202ENST00000356800 RXRGP48443 463 aa17.47■□□□□ 0.39
SMARCD3-202ENST00000356800 HMGCS1Q01581 520 aa17.47■□□□□ 0.39
SMARCD3-202ENST00000356800 HHEXQ03014 270 aa17.47■□□□□ 0.39
SMARCD3-202ENST00000356800 PRDX1Q06830 199 aaKnown RBP17.47■□□□□ 0.39
SMARCD3-202ENST00000356800 HERC3Q15034 1050 aa17.47■□□□□ 0.39
SMARCD3-202ENST00000356800 TMEM26Q6ZUK4 368 aa17.47■□□□□ 0.39
SMARCD3-202ENST00000356800 SPATA19Q7Z5L4 167 aa17.47■□□□□ 0.39
SMARCD3-202ENST00000356800 C17orf82Q86X59 251 aaPredicted RBP17.47■□□□□ 0.39
SMARCD3-202ENST00000356800 ZNF761Q86XN6 746 aaPredicted RBP17.47■□□□□ 0.39
SMARCD3-202ENST00000356800 ARL14Q8N4G2 192 aa17.47■□□□□ 0.39
SMARCD3-202ENST00000356800 ARID1BQ8NFD5 2236 aaPredicted RBP17.47■□□□□ 0.39
SMARCD3-202ENST00000356800 OR7G3Q8NG95 312 aa17.47■□□□□ 0.39
SMARCD3-202ENST00000356800 FLVCR1-AS1Q8TAF5 88 aa17.47■□□□□ 0.39
SMARCD3-202ENST00000356800 EFCAB11Q9BUY7 163 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms