RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 LMNTD1Q8N9Z9 388 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 MDM1Q8TC05 714 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 DCAKDQ8WVC6 231 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 ATL1Q8WXF7 558 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 USP7Q93009 1102 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 MTBPQ96DY7 904 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 SLC46A1Q96NT5 459 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 DHRS4Q9BTZ2 278 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 ASPSCR1Q9BZE9 553 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 EPB41L4BQ9H329 900 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 PDE7BQ9NP56 450 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 CCDC177Q9NQR7 707 aaPredicted RBP3.82□□□□□ -1.8
CNOT4-202ENST00000356162 SNX15Q9NRS6 342 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 OCIAD1Q9NX40 245 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 SOHLH2Q9NX45 425 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 SPHK1Q9NYA1 384 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 STOX2Q9P2F5 926 aaPredicted RBP3.82□□□□□ -1.8
CNOT4-202ENST00000356162 PSMC3IPQ9P2W1 217 aaPredicted RBP3.82□□□□□ -1.8
CNOT4-202ENST00000356162 CTNNAL1Q9UBT7 734 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 ADAMTS6Q9UKP5 1117 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 RARRES3Q9UL19 164 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 PDE10AQ9Y233 779 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 OARD1Q9Y530 152 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 IKBKGQ9Y6K9 419 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 SNRNP200O75643 2136 aaKnown RBP3.82□□□□□ -1.8
CNOT4-202ENST00000356162 BPTFQ12830 3046 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 SLC9B1P1A6NJY1 282 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 C9orf172C9J069 976 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 PHGDHO43175 533 aaKnown RBP3.82□□□□□ -1.8
CNOT4-202ENST00000356162 TLX3O43711 291 aaPredicted RBP3.82□□□□□ -1.8
CNOT4-202ENST00000356162 PIAS1O75925 651 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 FAM155BO75949 473 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 IPO13O94829 963 aaKnown RBP3.82□□□□□ -1.8
CNOT4-202ENST00000356162 SYF2O95926 243 aaKnown RBP3.82□□□□□ -1.8
CNOT4-202ENST00000356162 LTA4HP09960 611 aaKnown RBP3.82□□□□□ -1.8
CNOT4-202ENST00000356162 HIST1H2AGP0C0S8 130 aaPredicted RBP3.82□□□□□ -1.8
CNOT4-202ENST00000356162 EBLN1P0CF75 366 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 SLC35E2BP0CK96 405 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 LIPCP11150 499 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 CD1DP15813 335 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 HIST1H2ADP20671 130 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 SAT1P21673 171 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 HRH2P25021 359 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 SLC5A2P31639 672 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 GATA4P43694 442 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 SEPHS1P49903 392 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 TBPL1P62380 186 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 VSNL1P62760 191 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 ABATP80404 500 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 BMPR2Q13873 1038 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 PHKG1Q16816 387 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 PPP1R3AQ16821 1122 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 PRAMEF13Q5VWM6 474 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 LCTLQ6UWM7 567 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 TMEM207Q6UWW9 146 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 FRA10AC1Q70Z53 315 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 RNF44Q7L0R7 432 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 CMC1Q7Z7K0 106 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 TBC1D1Q86TI0 1168 aaPredicted RBP3.82□□□□□ -1.8
CNOT4-202ENST00000356162 LRRC56Q8IYG6 542 aaPredicted RBP3.82□□□□□ -1.8
CNOT4-202ENST00000356162 SYTL1Q8IYJ3 562 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 ZNF248Q8NDW4 579 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 OR2L3Q8NG85 312 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 AENQ8WTP8 325 aaKnown RBP3.82□□□□□ -1.8
CNOT4-202ENST00000356162 UBTD2Q8WUN7 234 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 ZNF480Q8WV37 535 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 KCNE4Q8WWG9 221 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 DLG3Q92796 817 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 FGF11Q92914 225 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 CAVIN3Q969G5 261 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 TCTN2Q96GX1 697 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 CABS1Q96KC9 395 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 HIST1H2AHQ96KK5 128 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 PPM1MQ96MI6 270 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 NRTNQ99748 197 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 HIST1H2AJQ99878 128 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 H2AFJQ9BTM1 129 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 SGPP1Q9BX95 441 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 CAB39LQ9H9S4 337 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 NMRAL1Q9HBL8 299 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 UTP6Q9NYH9 597 aaKnown RBP3.82□□□□□ -1.8
CNOT4-202ENST00000356162 NUDT4Q9NZJ9 180 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 FOXJ2Q9P0K8 574 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 CIDEBQ9UHD4 219 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 TMEM184BQ9Y519 407 aaPredicted RBP3.82□□□□□ -1.8
CNOT4-202ENST00000356162 KCNMB2Q9Y691 235 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 LAMA1P25391 3075 aa3.82□□□□□ -1.8
CNOT4-202ENST00000356162 IQANK1A0A1B0GTG1 560 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 OR2A25A4D2G3 310 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 KRT87PA6NCN2 255 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 TARM1B6A8C7 271 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 TRIM49D1C9J1S8 452 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 E7ENX8 843 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 POC1B-GALNT4F8VUJ3 575 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 STMND1H3BQB6 276 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 CDC7O00311 574 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 POLR1CO15160 346 aaPredicted RBP3.81□□□□□ -1.8
CNOT4-202ENST00000356162 RAD1O60671 282 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 KERAO60938 352 aa3.81□□□□□ -1.8
CNOT4-202ENST00000356162 CPNE3O75131 537 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms