RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 BCAP29Q9UHQ4 241 aa22.06■■□□□ 1.12
SCAMP3-202ENST00000355379 SH2B3Q9UQQ2 575 aa22.06■■□□□ 1.12
SCAMP3-202ENST00000355379 C9JVG2 144 aa22.05■■□□□ 1.12
SCAMP3-202ENST00000355379 FOXE1O00358 373 aaPredicted RBP22.05■■□□□ 1.12
SCAMP3-202ENST00000355379 SORBS2O94875 1100 aaKnown RBP22.05■■□□□ 1.12
SCAMP3-202ENST00000355379 CD6P30203 668 aa22.05■■□□□ 1.12
SCAMP3-202ENST00000355379 CLDN8P56748 225 aa22.05■■□□□ 1.12
SCAMP3-202ENST00000355379 SLBPQ14493 270 aaKnown RBP eCLIP22.05■■□□□ 1.12
SCAMP3-202ENST00000355379 UBXN2BQ14CS0 331 aa22.05■■□□□ 1.12
SCAMP3-202ENST00000355379 SPATS1Q496A3 300 aa22.05■■□□□ 1.12
SCAMP3-202ENST00000355379 DUS1LQ6P1R4 473 aaKnown RBP22.05■■□□□ 1.12
SCAMP3-202ENST00000355379 ABRAXAS1Q6UWZ7 409 aa22.05■■□□□ 1.12
SCAMP3-202ENST00000355379 LAYNQ6UX15 382 aa22.05■■□□□ 1.12
SCAMP3-202ENST00000355379 PRR23BQ6ZRT6 265 aa22.05■■□□□ 1.12
SCAMP3-202ENST00000355379 DPP10Q8N608 796 aa22.05■■□□□ 1.12
SCAMP3-202ENST00000355379 LRRC58Q96CX6 371 aa22.05■■□□□ 1.12
SCAMP3-202ENST00000355379 PDXPQ96GD0 296 aa22.05■■□□□ 1.12
SCAMP3-202ENST00000355379 APIPQ96GX9 242 aa22.05■■□□□ 1.12
SCAMP3-202ENST00000355379 SLC45A3Q96JT2 553 aa22.05■■□□□ 1.12
SCAMP3-202ENST00000355379 GEMIN8Q9NWZ8 242 aaKnown RBP22.05■■□□□ 1.12
SCAMP3-202ENST00000355379 ADA2Q9NZK5 511 aa22.05■■□□□ 1.12
SCAMP3-202ENST00000355379 PDZK1P1A8MUH7 402 aa22.04■■□□□ 1.12
SCAMP3-202ENST00000355379 RPE65Q16518 533 aa22.04■■□□□ 1.12
SCAMP3-202ENST00000355379 SAMD4BQ5PRF9 694 aaKnown RBP22.04■■□□□ 1.12
SCAMP3-202ENST00000355379 TPRG1LQ5T0D9 272 aa22.04■■□□□ 1.12
SCAMP3-202ENST00000355379 LMNTD1Q8N9Z9 388 aa22.04■■□□□ 1.12
SCAMP3-202ENST00000355379 HUS1BQ8NHY5 278 aa22.04■■□□□ 1.12
SCAMP3-202ENST00000355379 VPS33AQ96AX1 596 aa22.04■■□□□ 1.12
SCAMP3-202ENST00000355379 CLMPQ9H6B4 373 aa22.04■■□□□ 1.12
SCAMP3-202ENST00000355379 IMP3Q9NV31 184 aaKnown RBP22.04■■□□□ 1.12
SCAMP3-202ENST00000355379 NMRK1Q9NWW6 199 aa22.04■■□□□ 1.12
SCAMP3-202ENST00000355379 ABCD2Q9UBJ2 740 aa22.04■■□□□ 1.12
SCAMP3-202ENST00000355379 SUCOQ9UBS9 1254 aaKnown RBP22.04■■□□□ 1.12
SCAMP3-202ENST00000355379 FBXL21Q9UKT6 434 aa22.04■■□□□ 1.12
SCAMP3-202ENST00000355379 PCOLCE2Q9UKZ9 415 aa22.04■■□□□ 1.12
SCAMP3-202ENST00000355379 RUVBL1Q9Y265 456 aaKnown RBP22.04■■□□□ 1.12
SCAMP3-202ENST00000355379 PIPSLA2A3N6 862 aa22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 FAM170BA6NMN3 283 aa22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 FXYD1O00168 92 aa22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 KDM1AO60341 852 aa22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 MTHFD1P11586 935 aaKnown RBP22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 PCNAP12004 261 aa22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 CLNS1AP54105 237 aaKnown RBP22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 SRP54P61011 504 aaKnown RBP22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 CCNIQ14094 377 aa22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 PTGR1Q14914 329 aa22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 PAGE3Q5JUK9 113 aa22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 NOXRED1Q6NXP6 359 aa22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 Q6ZSR6 202 aa22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 C17orf64Q86WR6 236 aa22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 OR2L8Q8NGY9 312 aa22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 FAM174AQ8TBP5 190 aa22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 CCDC124Q96CT7 223 aaKnown RBP22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 MTERF1Q99551 399 aaKnown RBP22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 C2orf42Q9NWW7 574 aa22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 TRNAU1APQ9NX07 287 aaKnown RBP22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 NKX1-2Q9UD57 310 aaPredicted RBP22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 CD300AQ9UGN4 299 aa22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 PPT2Q9UMR5 302 aa22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 DLGAP4Q9Y2H0 992 aa22.03■■□□□ 1.12
SCAMP3-202ENST00000355379 A0A1W2PPV9 198 aa22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 MAGEB17A8MXT2 336 aa22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 KRT36O76013 467 aa22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 IL6P05231 212 aa22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 PKLRP30613 574 aa22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 RAB28P51157 221 aa22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 ZP2Q05996 745 aa22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 NFYCQ13952 458 aa22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 KRT33BQ14525 404 aa22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 TIGD2Q4W5G0 525 aa22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 FAM129CQ86XR2 697 aa22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 KRT78Q8N1N4 520 aa22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 RNF175Q8N4F7 328 aa22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 TSACCQ96A04 125 aaPredicted RBP22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 BIRC7Q96CA5 298 aa22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 C11orf24Q96F05 449 aaPredicted RBP22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 HHIPQ96QV1 700 aa22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 PITHD1Q9GZP4 211 aaPredicted RBP22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 PRDM8Q9NQV8 689 aa22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 SIRT5Q9NXA8 310 aa22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 DGKBQ9Y6T7 804 aa22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 COLEC10Q9Y6Z7 277 aa22.02■■□□□ 1.12
SCAMP3-202ENST00000355379 PRMT3O60678 531 aa22.01■■□□□ 1.11
SCAMP3-202ENST00000355379 MYO1DO94832 1006 aa22.01■■□□□ 1.11
SCAMP3-202ENST00000355379 CDH1P12830 882 aa22.01■■□□□ 1.11
SCAMP3-202ENST00000355379 SDC1P18827 310 aa22.01■■□□□ 1.11
SCAMP3-202ENST00000355379 XRCC1P18887 633 aaPredicted RBP22.01■■□□□ 1.11
SCAMP3-202ENST00000355379 CXCR2P25025 360 aa22.01■■□□□ 1.11
SCAMP3-202ENST00000355379 NDUFS1P28331 727 aa22.01■■□□□ 1.11
SCAMP3-202ENST00000355379 PIK3CBP42338 1070 aa22.01■■□□□ 1.11
SCAMP3-202ENST00000355379 PHEXP78562 749 aa22.01■■□□□ 1.11
SCAMP3-202ENST00000355379 DDX39BQ13838 428 aaKnown RBP22.01■■□□□ 1.11
SCAMP3-202ENST00000355379 RCN1Q15293 331 aa22.01■■□□□ 1.11
SCAMP3-202ENST00000355379 ALG11Q2TAA5 492 aa22.01■■□□□ 1.11
SCAMP3-202ENST00000355379 SPIN4Q56A73 249 aa22.01■■□□□ 1.11
SCAMP3-202ENST00000355379 DEFB123Q8N688 67 aa22.01■■□□□ 1.11
SCAMP3-202ENST00000355379 ABHD11Q8NFV4 315 aa22.01■■□□□ 1.11
SCAMP3-202ENST00000355379 APOLD1Q96LR9 279 aa22.01■■□□□ 1.11
SCAMP3-202ENST00000355379 GPR174Q9BXC1 333 aa22.01■■□□□ 1.11
SCAMP3-202ENST00000355379 CHRDQ9H2X0 955 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms