RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 PTX3P26022 381 aaPredicted RBP13.31□□□□□ -0.28
SMC6-201ENST00000351948 MPIP34949 423 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 SUZ12Q15022 739 aaKnown RBP13.31□□□□□ -0.28
SMC6-201ENST00000351948 GPR68Q15743 365 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 RABL3Q5HYI8 236 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 C6orf52Q5T4I8 152 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 SLC9B2Q86UD5 537 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 SVOPQ8N4V2 548 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 BCL7CQ8WUZ0 217 aaPredicted RBP13.31□□□□□ -0.28
SMC6-201ENST00000351948 TRMT2BQ96GJ1 504 aaKnown RBP13.31□□□□□ -0.28
SMC6-201ENST00000351948 DLGAP4Q9Y2H0 992 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 CLIC1O00299 241 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 MAN2B1O00754 1011 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 AP2A2O94973 939 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 ENGP17813 658 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 PBX2P40425 430 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 VSX2P58304 361 aaPredicted RBP13.31□□□□□ -0.28
SMC6-201ENST00000351948 EGFLAMQ63HQ2 1017 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 KDELC1Q6UW63 502 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 HSD11B1LQ7Z5J1 315 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 CAMKVQ8NCB2 501 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 CDCA3Q99618 268 aaPredicted RBP13.31□□□□□ -0.28
SMC6-201ENST00000351948 EBF2Q9HAK2 575 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 CLN6Q9NWW5 311 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 SNX7Q9UNH6 387 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 A0A087WXM4 84 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 PEX2P28328 305 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 PTCHD4Q6ZW05 846 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 ABHD13Q7L211 337 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 OR5M3Q8NGP4 307 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 RTP4Q96DX8 246 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 COL21A1Q96P44 957 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 ADI1Q9BV57 179 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 SMCHD1A6NHR9 2005 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 RTCAO00442 366 aaKnown RBP13.31□□□□□ -0.28
SMC6-201ENST00000351948 MUSKO15146 869 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 XRCC1P18887 633 aaPredicted RBP13.31□□□□□ -0.28
SMC6-201ENST00000351948 PTNP21246 168 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 CHN2P52757 468 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 ADAM17P78536 824 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 SLC7A9P82251 487 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 ADRM1Q16186 407 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 GHDCQ8N2G8 530 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 TTLQ8NG68 377 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 ROPN1LQ96C74 230 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 MTERF3Q96E29 417 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 UHRF1Q96T88 793 aaPredicted RBP13.31□□□□□ -0.28
SMC6-201ENST00000351948 TMEM27Q9HBJ8 222 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 COL4A5P29400 1685 aa13.31□□□□□ -0.28
SMC6-201ENST00000351948 MAN1A2O60476 641 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 REM1O75628 298 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 EBLN1P0CF75 366 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 PRG2P13727 222 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 TBPL1P62380 186 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 HNRNPA1L2Q32P51 320 aaKnown RBP13.3□□□□□ -0.28
SMC6-201ENST00000351948 EPGNQ6UW88 154 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 ABRAXAS1Q6UWZ7 409 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 SYVN1Q86TM6 617 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 SMYD1Q8NB12 490 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 ZNF248Q8NDW4 579 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 TSPAN14Q8NG11 270 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 LRRC58Q96CX6 371 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 TGM7Q96PF1 710 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 IL17CQ9P0M4 197 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 SLC7A8Q9UHI5 535 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 MRTO4Q9UKD2 239 aaKnown RBP13.3□□□□□ -0.28
SMC6-201ENST00000351948 ERVK-11Q9UQG0 969 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 CA5BQ9Y2D0 317 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 FADS3Q9Y5Q0 445 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 NUMBLQ9Y6R0 609 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 MATN2O00339 956 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 IL12BP29460 328 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 GJA4P35212 333 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 IGFALSP35858 605 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 C9orf50Q5SZB4 431 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 DUS1LQ6P1R4 473 aaKnown RBP13.3□□□□□ -0.28
SMC6-201ENST00000351948 PARS2Q7L3T8 475 aaKnown RBP13.3□□□□□ -0.28
SMC6-201ENST00000351948 HIPK1Q86Z02 1210 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 MRPL48Q96GC5 212 aaKnown RBP13.3□□□□□ -0.28
SMC6-201ENST00000351948 AURKBQ96GD4 344 aaPredicted RBP13.3□□□□□ -0.28
SMC6-201ENST00000351948 MCCC1Q96RQ3 725 aaPredicted RBP13.3□□□□□ -0.28
SMC6-201ENST00000351948 NDC1Q9BTX1 674 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 CXorf56Q9H5V9 222 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 WBP1LQ9NX94 342 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 ACSL5Q9ULC5 683 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 FZD4Q9ULV1 537 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 FAM170BA6NMN3 283 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 OR52A4PA6NMU1 304 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 HHLA1C9JL84 531 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 E7ENX8 843 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 NOBOXO60393 691 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 F11P03951 625 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 THEGLP0DJG4 465 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 CD247P20963 164 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 SLC26A3P40879 764 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 GRB7Q14451 532 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 NR1D2Q14995 579 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 INAQ16352 499 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 AAGABQ6PD74 315 aa13.3□□□□□ -0.28
SMC6-201ENST00000351948 OR8H2Q8N162 312 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms