RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 GFRA2O00451 464 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 SYN3O14994 580 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 ZNF682O95780 498 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 MRPL19P49406 292 aaKnown RBP12.88□□□□□ -0.35
IFT88-202ENST00000351808 CLCN5P51795 746 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 LCP2Q13094 533 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 IKZF1Q13422 519 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 ELOAQ14241 798 aaKnown RBP12.88□□□□□ -0.35
IFT88-202ENST00000351808 SSX1Q16384 188 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 GTDC1Q4AE62 458 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 LCN1P1Q5VSP4 162 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 EEF1DP3Q658K8 133 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 KRT73Q86Y46 540 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 LRRC71Q8N4P6 559 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 C18orf25Q96B23 403 aaPredicted RBP12.88□□□□□ -0.35
IFT88-202ENST00000351808 ZDHHC15Q96MV8 337 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 SLC9A7Q96T83 725 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 RAD9AQ99638 391 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 COA1Q9GZY4 146 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 MIXL1Q9H2W2 232 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 BRD7Q9NPI1 651 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 PCDHB16Q9NRJ7 776 aa12.88□□□□□ -0.35
IFT88-202ENST00000351808 NDRG2Q9UN36 371 aaKnown RBP12.88□□□□□ -0.35
IFT88-202ENST00000351808 XIRP1Q702N8 1843 aaKnown RBP12.88□□□□□ -0.35
IFT88-202ENST00000351808 SEC14L5O43304 696 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 RETP07949 1114 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 NPR3P17342 541 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 POU1F1P28069 291 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 SSTR2P30874 369 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 SP2Q02086 613 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 CAMK2GQ13555 558 aaPredicted RBP12.87□□□□□ -0.35
IFT88-202ENST00000351808 AMIGO3Q86WK7 504 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 C10orf111Q8N326 155 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 VPS37AQ8NEZ2 397 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 LPCAT1Q8NF37 534 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 OR11H4Q8NGC9 324 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 WDR48Q8TAF3 677 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 CEP76Q8TAP6 659 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 GPR152Q8TDT2 470 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 SLC9A6Q92581 669 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 ZBED6CLQ96FA7 236 aaPredicted RBP12.87□□□□□ -0.35
IFT88-202ENST00000351808 CELF6Q96J87 481 aaKnown RBP12.87□□□□□ -0.35
IFT88-202ENST00000351808 SORCS2Q96PQ0 1159 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 SECISBP2Q96T21 854 aaKnown RBP12.87□□□□□ -0.35
IFT88-202ENST00000351808 PITX2Q99697 317 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 RTP3Q9BQQ7 232 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 SHARPINQ9H0F6 387 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 TAS2R7Q9NYW3 318 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 FEM1BQ9UK73 627 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 ING4Q9UNL4 249 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 CRYL1Q9Y2S2 319 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 LACTBL1A8MY62 500 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 HNRNPCL2B2RXH8 293 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 KHNYNO15037 678 aaKnown RBP12.87□□□□□ -0.35
IFT88-202ENST00000351808 CD1DP15813 335 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 PAMP19021 973 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 CLCN4P51793 760 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 RBP5P82980 135 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 SLC14A2Q15849 920 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 XKR7Q5GH72 579 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 FAM209BQ5JX69 171 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 TRAPPC3LQ5T215 181 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 RETSATQ6NUM9 610 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 CHMP1BQ7LBR1 199 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 LILRB2Q8N423 598 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 SLC22A8Q8TCC7 542 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 TMEM245Q9H330 911 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 RPF1Q9H9Y2 349 aaKnown RBP12.87□□□□□ -0.35
IFT88-202ENST00000351808 TREX1Q9NSU2 369 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 PRMT7Q9NVM4 692 aaPredicted RBP12.87□□□□□ -0.35
IFT88-202ENST00000351808 ZNF225Q9UK10 706 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 PRELID3BQ9Y3B1 194 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 SAMHD1Q9Y3Z3 626 aaKnown RBP12.87□□□□□ -0.35
IFT88-202ENST00000351808 CSNK1G3Q9Y6M4 447 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 TP53BP1Q12888 1972 aaPredicted RBP12.87□□□□□ -0.35
IFT88-202ENST00000351808 LOC102723532A0A0G2JNH3 316 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 A0A1W2PQL4 384 aaPredicted RBP12.87□□□□□ -0.35
IFT88-202ENST00000351808 CCL22O00626 93 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 CFDP00746 253 aaPredicted RBP12.87□□□□□ -0.35
IFT88-202ENST00000351808 ADRA2AP08913 450 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 DNAJA1P31689 397 aaKnown RBP12.87□□□□□ -0.35
IFT88-202ENST00000351808 IDH2P48735 452 aaKnown RBP12.87□□□□□ -0.35
IFT88-202ENST00000351808 RAB14P61106 215 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 SPDYE7PQ495Y7 208 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 NOMO2Q5JPE7 1267 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 FAM181AQ8N9Y4 354 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 OR7G3Q8NG95 312 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 BTN2A2Q8WVV5 523 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 MTERF3Q96E29 417 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 ZSWIM3Q96MP5 696 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 ZNF599Q96NL3 588 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 PLCXD1Q9NUJ7 323 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 RBFOX1Q9NWB1 397 aaKnown RBP12.87□□□□□ -0.35
IFT88-202ENST00000351808 SLC25A37Q9NYZ2 338 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 UBQLN2Q9UHD9 624 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 ZNF112Q9UJU3 913 aa12.87□□□□□ -0.35
IFT88-202ENST00000351808 CD3EAPO15446 510 aaKnown RBP12.86□□□□□ -0.35
IFT88-202ENST00000351808 B4GALT5O43286 388 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 MPC2O95563 127 aa12.86□□□□□ -0.35
IFT88-202ENST00000351808 IFNA7P01567 189 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms