RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 SPTBP11277 2137 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 FGF5P12034 268 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 SLC5A2P31639 672 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 SLC6A12P48065 614 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 GPR19Q15760 415 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 TBC1D25Q3MII6 688 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 THOC6Q86W42 341 aaKnown RBP13.39□□□□□ -0.27
SEC13-202ENST00000350697 C17orf64Q86WR6 236 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 PPP1R3BQ86XI6 285 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 KLHDC8AQ8IYD2 350 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 IQCKQ8N0W5 287 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 DNAJC22Q8N4W6 341 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 MDM1Q8TC05 714 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 PMEPA1Q969W9 287 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 ZNF501Q96CX3 271 aaPredicted RBP13.39□□□□□ -0.27
SEC13-202ENST00000350697 SCYL1Q96KG9 808 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 CTRCQ99895 268 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 MRPL57Q9BQC6 102 aaKnown RBP13.39□□□□□ -0.27
SEC13-202ENST00000350697 PLCD4Q9BRC7 762 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 PTBP2Q9UKA9 531 aaKnown RBP13.39□□□□□ -0.27
SEC13-202ENST00000350697 IGKV1-8A0A0C4DH67 115 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 C1QTNF9BB2RNN3 333 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 TMEM150CB9EJG8 249 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 STK16O75716 305 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 GSTA1P08263 222 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 C1QTNF9P0C862 333 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 MTHFD2P13995 350 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 CD82P27701 267 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 GABRA4P48169 554 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 ZNF844Q08AG5 666 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 C18orf21Q32NC0 220 aaPredicted RBP13.39□□□□□ -0.27
SEC13-202ENST00000350697 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.39□□□□□ -0.27
SEC13-202ENST00000350697 ZC3H12BQ5HYM0 836 aaKnown RBP13.39□□□□□ -0.27
SEC13-202ENST00000350697 ZNF425Q6IV72 752 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 SH2D5Q6ZV89 423 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 N4BP2L2Q92802 583 aaPredicted RBP13.39□□□□□ -0.27
SEC13-202ENST00000350697 FCRL4Q96PJ5 515 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 OR4K3Q96R72 315 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 TMEM79Q9BSE2 394 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 MRPL46Q9H2W6 279 aaKnown RBP13.39□□□□□ -0.27
SEC13-202ENST00000350697 TMEM184CQ9NVA4 438 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 CUEDC1Q9NWM3 386 aaPredicted RBP13.39□□□□□ -0.27
SEC13-202ENST00000350697 FOXJ2Q9P0K8 574 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 XPR1Q9UBH6 696 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 DCDC2Q9UHG0 476 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 SERTAD3Q9UJW9 196 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 ACSL6Q9UKU0 697 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 PLCL2Q9UPR0 1127 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 SLC22A14Q9Y267 594 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 KCNE2Q9Y6J6 123 aa13.39□□□□□ -0.27
SEC13-202ENST00000350697 FRYQ5TBA9 3013 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 TMEM8BA6NDV4 472 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 FOXO6A8MYZ6 492 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 H7BY64 318 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 KLK8O60259 260 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 CTSVO60911 334 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 WDR47O94967 919 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 CAPNS1P04632 268 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 GFAPP14136 432 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 EZRP15311 586 aaKnown RBP13.38□□□□□ -0.27
SEC13-202ENST00000350697 GDF5P43026 501 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 HSPA7P48741 367 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 ALDH18A1P54886 795 aaKnown RBP13.38□□□□□ -0.27
SEC13-202ENST00000350697 RELAQ04206 551 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 DEFB110Q30KQ9 67 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 KRT71Q3SY84 523 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 LRIG3Q6UXM1 1119 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 RNF44Q7L0R7 432 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 ADCK2Q7Z695 626 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 CROCCP2Q86T23 111 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 PAQR7Q86WK9 346 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 OR1L3Q8NH93 324 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 UBTD2Q8WUN7 234 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 FGF11Q92914 225 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 PRAP1Q96NZ9 151 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 CPSF2Q9P2I0 782 aaKnown RBP13.38□□□□□ -0.27
SEC13-202ENST00000350697 PILRAQ9UKJ1 303 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 TMCO1Q9UM00 188 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 SH2B3Q9UQQ2 575 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 DYRK1BQ9Y463 629 aa13.38□□□□□ -0.27
SEC13-202ENST00000350697 TK2O00142 265 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 HCRTR1O43613 425 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 SMIM24O75264 130 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 GLRA3O75311 464 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 CDH1P12830 882 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 KRT4P19013 534 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 CCT5P48643 541 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 ITGA1P56199 1179 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 CDC16Q13042 620 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 SETDB1Q15047 1291 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 PFKFB4Q16877 469 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 FBXO48Q5FWF7 155 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 PWWP2BQ6NUJ5 590 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 TRABD2AQ86V40 505 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 MCATQ8IVS2 390 aaKnown RBP13.37□□□□□ -0.27
SEC13-202ENST00000350697 GPR135Q8IZ08 494 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 ABHD11Q8NFV4 315 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 SLC5A11Q8WWX8 675 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 NEIL2Q969S2 332 aa13.37□□□□□ -0.27
SEC13-202ENST00000350697 ESAMQ96AP7 390 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms