RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 LINC01565O15544 149 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 SH3BP5O60239 455 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 FSHRP23945 695 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 IL12RB1P42701 662 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 MAGEA8P43361 318 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 RXRGP48443 463 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 APOFQ13790 326 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 ADRM1Q16186 407 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 GPR180Q86V85 440 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 ISOC1Q96CN7 298 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 C1QTNF3Q9BXJ4 246 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 REXO4Q9GZR2 422 aaKnown RBP13.47□□□□□ -0.25
TRIM4-201ENST00000349062 ADNPQ9H2P0 1102 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 CCM2LQ9NUG4 571 aaPredicted RBP13.47□□□□□ -0.25
TRIM4-201ENST00000349062 SMOXQ9NWM0 555 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 SH2B3Q9UQQ2 575 aa13.47□□□□□ -0.25
TRIM4-201ENST00000349062 PCYT1BQ9Y5K3 369 aaPredicted RBP13.47□□□□□ -0.25
TRIM4-201ENST00000349062 IGLON5A6NGN9 336 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 H3BNH8 94 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 CLOCKO15516 846 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 C8GP07360 202 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 CYP4B1P13584 511 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 SDC1P18827 310 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 CD22P20273 847 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 PTGER1P34995 402 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 MTHFRP42898 656 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 BNIP2Q12982 314 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 PWP1Q13610 501 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 GALNT5Q7Z7M9 940 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 EPHX4Q8IUS5 362 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 GTF2H4Q92759 462 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 NEIL2Q969S2 332 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 NUS1Q96E22 293 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 ZSCAN5AQ9BUG6 496 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 TMEM121BQ9BXQ6 578 aaPredicted RBP13.46□□□□□ -0.25
TRIM4-201ENST00000349062 PBX4Q9BYU1 374 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 CEP44Q9C0F1 390 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 SLC52A3Q9NQ40 469 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 SLC25A37Q9NYZ2 338 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 AASSQ9UDR5 926 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 WARS2Q9UGM6 360 aaKnown RBP13.46□□□□□ -0.25
TRIM4-201ENST00000349062 hCG_2039718K7EN88 272 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 B4GAT1O43505 415 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 ATE1O95260 518 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 ETHE1O95571 254 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 PFN3P60673 137 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 RPS13P62277 151 aaKnown RBP13.46□□□□□ -0.25
TRIM4-201ENST00000349062 SHHQ15465 462 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 EGFLAMQ63HQ2 1017 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 OR5AK3PQ8NH89 298 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 OSCP1Q8WVF1 389 aa13.46□□□□□ -0.25
TRIM4-201ENST00000349062 STOX2Q9P2F5 926 aaPredicted RBP13.46□□□□□ -0.25
TRIM4-201ENST00000349062 MGAT4DA6NG13 374 aa13.46□□□□□ -0.26
TRIM4-201ENST00000349062 ZNF182P17025 639 aaPredicted RBP13.46□□□□□ -0.26
TRIM4-201ENST00000349062 GDI1P31150 447 aa13.46□□□□□ -0.26
TRIM4-201ENST00000349062 ALDH9A1P49189 494 aa13.46□□□□□ -0.26
TRIM4-201ENST00000349062 CNTN1Q12860 1018 aa13.46□□□□□ -0.26
TRIM4-201ENST00000349062 SLC14A1Q13336 389 aa13.46□□□□□ -0.26
TRIM4-201ENST00000349062 AASDHQ4L235 1098 aaPredicted RBP13.46□□□□□ -0.26
TRIM4-201ENST00000349062 PRSS36Q5K4E3 855 aa13.46□□□□□ -0.26
TRIM4-201ENST00000349062 PDE12Q6L8Q7 609 aaKnown RBP13.46□□□□□ -0.26
TRIM4-201ENST00000349062 NOXRED1Q6NXP6 359 aa13.46□□□□□ -0.26
TRIM4-201ENST00000349062 CHERPQ8IWX8 916 aaKnown RBP13.46□□□□□ -0.26
TRIM4-201ENST00000349062 PARP8Q8N3A8 854 aa13.46□□□□□ -0.26
TRIM4-201ENST00000349062 TRPV3Q8NET8 790 aa13.46□□□□□ -0.26
TRIM4-201ENST00000349062 CXorf40AQ8TE69 158 aa13.46□□□□□ -0.26
TRIM4-201ENST00000349062 MAL2Q969L2 176 aa13.46□□□□□ -0.26
TRIM4-201ENST00000349062 LYSMD1Q96S90 227 aa13.46□□□□□ -0.26
TRIM4-201ENST00000349062 CARS2Q9HA77 564 aaKnown RBP13.46□□□□□ -0.26
TRIM4-201ENST00000349062 PPT2Q9UMR5 302 aa13.46□□□□□ -0.26
TRIM4-201ENST00000349062 TCF20Q9UGU0 1960 aaKnown RBP13.46□□□□□ -0.26
TRIM4-201ENST00000349062 RTCAO00442 366 aaKnown RBP13.45□□□□□ -0.26
TRIM4-201ENST00000349062 SGTAO43765 313 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 SERPINA1P01009 418 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 CST1P01037 141 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 ANXA6P08133 673 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 TMED10P49755 219 aaKnown RBP13.45□□□□□ -0.26
TRIM4-201ENST00000349062 MC1RQ01726 317 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 SFSWAPQ12872 951 aaKnown RBP13.45□□□□□ -0.26
TRIM4-201ENST00000349062 HENMT1Q5T8I9 393 aaKnown RBP13.45□□□□□ -0.26
TRIM4-201ENST00000349062 MACROD1Q9BQ69 325 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 CCM2Q9BSQ5 444 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 MTIF3Q9H2K0 278 aaKnown RBP13.45□□□□□ -0.26
TRIM4-201ENST00000349062 HEBP1Q9NRV9 189 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 RAPGEFL1Q9UHV5 662 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 SH3PXD2BA1X283 911 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 AREL1O15033 823 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 MID1O15344 667 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 SLC31A1O15431 190 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 ANXA4P09525 319 aaPredicted RBP13.45□□□□□ -0.26
TRIM4-201ENST00000349062 PIM1P11309 404 aaPredicted RBP13.45□□□□□ -0.26
TRIM4-201ENST00000349062 HSD17B1P14061 328 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 SOAT1P35610 550 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 MMP12P39900 470 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 PERM1Q5SV97 790 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 OR5AR1Q8NGP9 310 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 ARMC5Q96C12 935 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 ZNF583Q96ND8 569 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 LGR4Q9BXB1 951 aa13.45□□□□□ -0.26
TRIM4-201ENST00000349062 XKR8Q9H6D3 395 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms