RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 OR2B6P58173 313 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 SLC36A3Q495N2 470 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 GPAT3Q53EU6 434 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 KCTD11Q693B1 232 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 DPP10Q8N608 796 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 ZNF614Q8N883 585 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 KCNN1Q92952 543 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 AHCYL2Q96HN2 611 aaKnown RBP14.36□□□□□ -0.11
NUP50-201ENST00000347635 MTERF1Q99551 399 aaKnown RBP14.36□□□□□ -0.11
NUP50-201ENST00000347635 SEMA3GQ9NS98 782 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 PTGFRNQ9P2B2 879 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 USP3Q9Y6I4 520 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 A0A0D9SEW6 157 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 KRT87PA6NCN2 255 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 CASKO14936 926 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 OAZ2O95190 189 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 SLC35G4P0C7Q5 338 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 FOXA1P55317 472 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 RING1Q06587 406 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 PTGR1Q14914 329 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 DCST1Q5T197 706 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 CACUL1Q86Y37 369 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 ZNF280BQ86YH2 543 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 GATAD2AQ86YP4 633 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 IGSF8Q969P0 613 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 FAIM2Q9BWQ8 316 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 CFL2Q9Y281 166 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 SLC27A6Q9Y2P4 619 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 PTGESO14684 152 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 NOS3P29474 1203 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 MAP2K4P45985 399 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 METTL25Q8N6Q8 603 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 EHD1Q9H4M9 534 aa14.36□□□□□ -0.11
NUP50-201ENST00000347635 LRRC72A6NJI9 287 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 OR2AG2A6NM03 316 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 SMIM18P0DKX4 95 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 SDC2P34741 201 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 MAGEA12P43365 314 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 SEMA3AQ14563 771 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 ZBTB6Q15916 424 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 IQCCQ4KMZ1 466 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 BHLHB9Q6PI77 547 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 PLET1Q6UQ28 207 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 ENPP6Q6UWR7 440 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 CYP4V2Q6ZWL3 525 aaPredicted RBP14.35□□□□□ -0.11
NUP50-201ENST00000347635 C9orf43Q8TAL5 461 aaPredicted RBP14.35□□□□□ -0.11
NUP50-201ENST00000347635 PYCR2Q96C36 320 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 TDP1Q9NUW8 608 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 ERVK-18Q9QC07 812 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 PCTPQ9UKL6 214 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 RNF6Q9Y252 685 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 POFUT2Q9Y2G5 429 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 CSKP41240 450 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 FBXW4P57775 412 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 FRG2Q64ET8 278 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 OR10T2Q8NGX3 314 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 TMEM40Q8WWA1 233 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 FRG2BQ96QU4 278 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 C1QTNF1Q9BXJ1 281 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 FAM83DQ9H4H8 585 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 VPS29Q9UBQ0 182 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 PCDHGA11Q9Y5H2 935 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 TBC1D3DA0A087WVF3 549 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 TBC1D3IA0A087WXS9 549 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 TBC1D3EA0A087X179 549 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 TBC1D3KA0A087X1G2 549 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 TBC1D3FA6NER0 549 aaPredicted RBP14.35□□□□□ -0.11
NUP50-201ENST00000347635 TBC1D3LB9A6J9 549 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 ACOT8O14734 319 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 INPPL1O15357 1258 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 TBC1D3HP0C7X1 549 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 CBSLP0DN79 551 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 CBSP35520 551 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 BUD31P41223 144 aaPredicted RBP14.35□□□□□ -0.11
NUP50-201ENST00000347635 TBC1D3GQ6DHY5 549 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 TBC1D3CQ6IPX1 549 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 TBC1D3Q8IZP1 549 aaPredicted RBP14.35□□□□□ -0.11
NUP50-201ENST00000347635 SLC30A3Q99726 388 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 KCNH6Q9H252 994 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 POLMQ9NP87 494 aaPredicted RBP14.35□□□□□ -0.11
NUP50-201ENST00000347635 SEC14L3Q9UDX4 400 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 DHRS7Q9Y394 339 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 FUOMA2VDF0 154 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 ABRAXAS2Q15018 415 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 PAGE3Q5JUK9 113 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 KDELC1Q6UW63 502 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 LGI4Q8N135 537 aa14.35□□□□□ -0.11
NUP50-201ENST00000347635 TNNI3P19429 210 aa14.34□□□□□ -0.11
NUP50-201ENST00000347635 PNLIPRP1P54315 467 aa14.34□□□□□ -0.11
NUP50-201ENST00000347635 SCARB2Q14108 478 aa14.34□□□□□ -0.11
NUP50-201ENST00000347635 CARD16Q5EG05 197 aa14.34□□□□□ -0.11
NUP50-201ENST00000347635 ZNF783Q6ZMS7 281 aa14.34□□□□□ -0.11
NUP50-201ENST00000347635 SCML4Q8N228 414 aa14.34□□□□□ -0.11
NUP50-201ENST00000347635 KRTCAP2Q8N6L1 136 aa14.34□□□□□ -0.11
NUP50-201ENST00000347635 KHSRPQ92945 711 aaKnown RBP eCLIP14.34□□□□□ -0.111e-7■□□□□ 8.2
NUP50-201ENST00000347635 FUBP1Q96AE4 644 aaKnown RBP14.34□□□□□ -0.11
NUP50-201ENST00000347635 C3orf30Q96M34 536 aa14.34□□□□□ -0.11
NUP50-201ENST00000347635 ZDHHC3Q9NYG2 299 aa14.34□□□□□ -0.11
NUP50-201ENST00000347635 RPS6KB2Q9UBS0 482 aa14.34□□□□□ -0.11
NUP50-201ENST00000347635 H3BM21 787 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms