RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 KIAA0408Q6ZU52 694 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 NPWQ8N729 165 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 SNIP1Q8TAD8 396 aaKnown RBP10.61□□□□□ -0.71
CLCN6-202ENST00000346436 TMEM74Q96NL1 305 aa10.61□□□□□ -0.71
CLCN6-202ENST00000346436 SMPD3Q9NY59 655 aaPredicted RBP10.61□□□□□ -0.71
CLCN6-202ENST00000346436 MYO18AQ92614 2054 aaKnown RBP10.61□□□□□ -0.71
CLCN6-202ENST00000346436 SNNO75324 88 aaPredicted RBP10.6□□□□□ -0.71
CLCN6-202ENST00000346436 H6PDO95479 791 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 IL33O95760 270 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 GRK6P43250 576 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 GSTM5P46439 218 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 RPS6KA3P51812 740 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 NIPAL4Q0D2K0 466 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 ABHD17BQ5VST6 288 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 RASSF6Q6ZTQ3 369 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 ASB9Q96DX5 294 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 MAP3K3Q99759 626 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 CMKLR1Q99788 373 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 PELOQ9BRX2 385 aaKnown RBP10.6□□□□□ -0.71
CLCN6-202ENST00000346436 CXCL16Q9H2A7 254 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 GMPPBQ9Y5P6 360 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 ARAP2Q8WZ64 1704 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 SCN7AQ01118 1682 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 COL22A1Q8NFW1 1626 aaPredicted RBP10.6□□□□□ -0.71
CLCN6-202ENST00000346436 IGKV6D-21A0A0A0MT36 114 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 CENPXA8MT69 81 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 RFXANKO14593 260 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 MUSKO15146 869 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 KCNJ13O60928 360 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 PEX14O75381 377 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 GATMP50440 423 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 MTTPP55157 894 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 DSC1Q08554 894 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 RCAN2Q14206 197 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 MAPK14Q16539 360 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 MBOAT1Q6ZNC8 495 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 KCTD8Q6ZWB6 473 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 ADGRG6Q86SQ4 1221 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 NUDT13Q86X67 352 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 SVOPQ8N4V2 548 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 PHF10Q8WUB8 498 aaKnown RBP10.6□□□□□ -0.71
CLCN6-202ENST00000346436 ABCB10Q9NRK6 738 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 PTTG2Q9NZH5 202 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 MEIS3P2A8K0S8 358 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 ACVRL1P37023 503 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 CEACAM7Q14002 265 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 RGS21Q2M5E4 152 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 SIRPB2Q5JXA9 342 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 MANEAQ5SRI9 462 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 RNF19BQ6ZMZ0 732 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 ZNF605Q86T29 641 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 UBALD2Q8IYN6 164 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 OR10A6Q8NH74 314 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 EXOSC8Q96B26 276 aaKnown RBP10.6□□□□□ -0.71
CLCN6-202ENST00000346436 EFHD2Q96C19 240 aaPredicted RBP10.6□□□□□ -0.71
CLCN6-202ENST00000346436 FAM117AQ9C073 453 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 SOX17Q9H6I2 414 aaPredicted RBP10.6□□□□□ -0.71
CLCN6-202ENST00000346436 IPPKQ9H8X2 491 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 PLEKHA1Q9HB21 404 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 GDAP2Q9NXN4 497 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 ZNF490Q9ULM2 529 aaPredicted RBP10.6□□□□□ -0.71
CLCN6-202ENST00000346436 TPRKBQ9Y3C4 175 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 TOR1BO14657 336 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 NIPSNAP2O75323 286 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 DHCR24Q15392 516 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 TBC1D21Q8IYX1 336 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 CCDC54Q8NEL0 328 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 PSMA8Q8TAA3 256 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 HM13Q8TCT9 377 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 PAAF1Q9BRP4 392 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 C16orf70Q9BSU1 422 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 RGS17Q9UGC6 210 aaPredicted RBP10.6□□□□□ -0.71
CLCN6-202ENST00000346436 DFNA5O60443 496 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 CNTN5O94779 1100 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 DBTP11182 482 aaKnown RBP10.6□□□□□ -0.71
CLCN6-202ENST00000346436 BMP4P12644 408 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 FBLP22087 321 aaKnown RBP10.6□□□□□ -0.71
CLCN6-202ENST00000346436 PROZP22891 400 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 MPIP34949 423 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 GDI2P50395 445 aaKnown RBP10.6□□□□□ -0.71
CLCN6-202ENST00000346436 ZNF41P51814 821 aaPredicted RBP10.6□□□□□ -0.71
CLCN6-202ENST00000346436 RABL3Q5HYI8 236 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 C14orf80Q86SX3 495 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 TRPV3Q8NET8 790 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 OR5L2Q8NGL0 311 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 CENPNQ96H22 339 aaPredicted RBP10.6□□□□□ -0.71
CLCN6-202ENST00000346436 EPYCQ99645 322 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 CKLFQ9UBR5 152 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 HS3ST4Q9Y661 456 aa10.6□□□□□ -0.71
CLCN6-202ENST00000346436 KPNA4O00629 521 aaPredicted RBP10.59□□□□□ -0.71
CLCN6-202ENST00000346436 ABCB7O75027 752 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 POP7O75817 140 aaKnown RBP10.59□□□□□ -0.71
CLCN6-202ENST00000346436 FADS2O95864 444 aaKnown RBP10.59□□□□□ -0.71
CLCN6-202ENST00000346436 TSPAN19P0C672 248 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 CST5P28325 142 aaPredicted RBP10.59□□□□□ -0.71
CLCN6-202ENST00000346436 ST13P50502 369 aaKnown RBP10.59□□□□□ -0.71
CLCN6-202ENST00000346436 RGS8P57771 180 aaPredicted RBP10.59□□□□□ -0.71
CLCN6-202ENST00000346436 GALNT2Q10471 571 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 OGFOD2Q6N063 350 aa10.59□□□□□ -0.71
CLCN6-202ENST00000346436 IKBIPQ70UQ0 350 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms