RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 BPNT1O95861 308 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 PDYNP01213 254 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 G6PDP11413 515 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 SLC2A4P14672 509 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 ME2P23368 584 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 TNFRSF4P43489 277 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 MRPL19P49406 292 aaKnown RBP8.95□□□□□ -0.98
ATG4A-202ENST00000345734 NEK2P51955 445 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 AP2B1P63010 937 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 RPL38P63173 70 aaKnown RBP8.95□□□□□ -0.98
ATG4A-202ENST00000345734 EMX2Q04743 252 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 GTF2H3Q13889 308 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 WSCD2Q2TBF2 565 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 IL23RQ5VWK5 629 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 PNCKQ6P2M8 343 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 RNF111Q6ZNA4 994 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 MTSS1LQ765P7 747 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 SLITRK4Q8IW52 837 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 PPFIBP2Q8ND30 876 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 PROKR1Q8TCW9 393 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 CSGALNACT1Q8TDX6 532 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 KLK6Q92876 244 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 USP7Q93009 1102 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 SLC35B4Q969S0 331 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 FBXL8Q96CD0 374 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 HIC2Q96JB3 615 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 PKP4Q99569 1192 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 LGR4Q9BXB1 951 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 ADAM19Q9H013 955 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 ACTL8Q9H568 366 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 HEBP1Q9NRV9 189 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 DNAJC11Q9NVH1 559 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 STOX2Q9P2F5 926 aaPredicted RBP8.95□□□□□ -0.98
ATG4A-202ENST00000345734 STOML1Q9UBI4 398 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 NDUFAF1Q9Y375 327 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 ELOA3CA0A087WX78 387 aaPredicted RBP8.95□□□□□ -0.98
ATG4A-202ENST00000345734 PRORSD1PA6NEY8 169 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 ELOA3DA6NLF2 546 aaPredicted RBP8.95□□□□□ -0.98
ATG4A-202ENST00000345734 BBIP1A8MTZ0 92 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 ANHXE9PGG2 379 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 H3BM21 787 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 TRIM38O00635 465 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 RGS14O43566 566 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 RNASEH1O60930 286 aaKnown RBP8.95□□□□□ -0.98
ATG4A-202ENST00000345734 FKBP6O75344 327 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 RNASEH2AO75792 299 aaKnown RBP8.95□□□□□ -0.98
ATG4A-202ENST00000345734 POP7O75817 140 aaKnown RBP8.95□□□□□ -0.98
ATG4A-202ENST00000345734 EGFP01133 1207 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 ALBP02768 609 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 POLR2JP52435 117 aaKnown RBP8.95□□□□□ -0.98
ATG4A-202ENST00000345734 SLC7A2P52569 658 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 RPS14P62263 151 aaKnown RBP8.95□□□□□ -0.98
ATG4A-202ENST00000345734 MRPS35P82673 323 aaKnown RBP8.95□□□□□ -0.98
ATG4A-202ENST00000345734 NAE1Q13564 534 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 RCAN2Q14206 197 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 FLOT2Q14254 428 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 CAPRIN1Q14444 709 aaKnown RBP8.95□□□□□ -0.98
ATG4A-202ENST00000345734 NFE2L1Q14494 772 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 ELOA3BQ3SY89 546 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 CMPK2Q5EBM0 449 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 PAGE3Q5JUK9 113 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 TTC23LQ6PF05 361 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 C16orf87Q6PH81 154 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 CYP20A1Q6UW02 462 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 HACD2Q6Y1H2 254 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 LRRC74BQ6ZQY2 392 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 FAM83HQ6ZRV2 1179 aaPredicted RBP8.95□□□□□ -0.98
ATG4A-202ENST00000345734 KBTBD6Q86V97 674 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 HEATR4Q86WZ0 1026 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 CELF2-AS1Q8N7Q2 184 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 LMNTD1Q8N9Z9 388 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 PCYOX1LQ8NBM8 494 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 ELOA3Q8NG57 546 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 MED8Q96G25 268 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 COX14Q96I36 57 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 PPP3R2Q96LZ3 170 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 MDFIQ99750 246 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 GPATCH1Q9BRR8 931 aaKnown RBP8.95□□□□□ -0.98
ATG4A-202ENST00000345734 SLC29A3Q9BZD2 475 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 MKRN2Q9H000 416 aaKnown RBP8.95□□□□□ -0.98
ATG4A-202ENST00000345734 PCDHAC1Q9H158 963 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 MBNL1Q9NR56 388 aaKnown RBP8.95□□□□□ -0.98
ATG4A-202ENST00000345734 INTS7Q9NVH2 962 aaKnown RBP8.95□□□□□ -0.98
ATG4A-202ENST00000345734 ZIM2Q9NZV7 527 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 TMEM181Q9P2C4 612 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 EPS15L1Q9UBC2 864 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 MTCH2Q9Y6C9 303 aa8.95□□□□□ -0.98
ATG4A-202ENST00000345734 TRIOBPQ9H2D6 2365 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 A0A1W2PP18 115 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 PRR23AA6NEV1 266 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 ADARB2-AS1A8MUL3 147 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 FXYD1O00168 92 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 SLC28A1O00337 649 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 ACOT8O14734 319 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 ANKRD28O15084 1053 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 ADAM23O75077 832 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 C1orf105O95561 183 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 SLC16A8O95907 504 aa8.94□□□□□ -0.98
ATG4A-202ENST00000345734 CATP04040 527 aaKnown RBP8.94□□□□□ -0.98
ATG4A-202ENST00000345734 C5AR1P21730 350 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms