RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 PDXPQ96GD0 296 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 KATNAL1Q9BW62 490 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 SLC6A15Q9H2J7 730 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 MICAL3Q7RTP6 2002 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 LGI1O95970 557 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 DGKQP52824 942 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 PURAQ00577 322 aaKnown RBP18.01■□□□□ 0.47
SMPD1-201ENST00000342245 UBE3AQ05086 875 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 GPR139Q6DWJ6 353 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 RANBP10Q6VN20 620 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 C1orf52Q8N6N3 182 aaKnown RBP18.01■□□□□ 0.47
SMPD1-201ENST00000342245 ZBTB44Q8NCP5 570 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 TRMT61AQ96FX7 289 aaKnown RBP18.01■□□□□ 0.47
SMPD1-201ENST00000342245 RPRD1AQ96P16 312 aaPredicted RBP18.01■□□□□ 0.47
SMPD1-201ENST00000342245 PPIL3Q9H2H8 161 aaKnown RBP18.01■□□□□ 0.47
SMPD1-201ENST00000342245 PIGUQ9H490 435 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 ZNF277Q9NRM2 450 aaPredicted RBP18.01■□□□□ 0.47
SMPD1-201ENST00000342245 RNF146Q9NTX7 359 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 EVA1BQ9NVM1 165 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 TAS2R7Q9NYW3 318 aa18.01■□□□□ 0.47
SMPD1-201ENST00000342245 KLF2Q9Y5W3 355 aaPredicted RBP18.01■□□□□ 0.47
SMPD1-201ENST00000342245 SYNJ2BP-COX16A0A087WUM0 186 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 FAM72CH0Y354 149 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 H0YC42 278 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 GABRDO14764 452 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 PLA2G10O15496 165 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 OR4F21O95013 312 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 MT-CYBP00156 380 aaPredicted RBP18■□□□□ 0.47
SMPD1-201ENST00000342245 IL6P05231 212 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 FABP3P05413 133 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 STSP08842 583 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 G6PDP11413 515 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 ICAM3P32942 547 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 VEPH1Q14D04 833 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 TSTQ16762 297 aaKnown RBP18■□□□□ 0.47
SMPD1-201ENST00000342245 FAM72AQ5TYM5 149 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 SYPL2Q5VXT5 272 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 OR4F3Q6IEY1 312 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 FAM72DQ6L9T8 149 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 GPRIN3Q6ZVF9 776 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 FAM72BQ86X60 149 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 CAMKK1Q8N5S9 505 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 C7orf31Q8N865 590 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 C19orf18Q8NEA5 215 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 FBXW5Q969U6 566 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 NECTIN4Q96NY8 510 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 ACTL8Q9H568 366 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 REEP1Q9H902 201 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 FAM105AQ9NUU6 356 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 MCUBQ9NWR8 336 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 COX16Q9P0S2 106 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 ZNF490Q9ULM2 529 aaPredicted RBP18■□□□□ 0.47
SMPD1-201ENST00000342245 RNF112Q9ULX5 631 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 SAMHD1Q9Y3Z3 626 aaKnown RBP18■□□□□ 0.47
SMPD1-201ENST00000342245 FZD6O60353 706 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 HOXB3P14651 431 aaPredicted RBP18■□□□□ 0.47
SMPD1-201ENST00000342245 RPS19P39019 145 aaKnown RBP18■□□□□ 0.47
SMPD1-201ENST00000342245 ST3GAL4Q11206 333 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 RBBP7Q16576 425 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 HABP4Q5JVS0 413 aaKnown RBP18■□□□□ 0.47
SMPD1-201ENST00000342245 ANKRD54Q6NXT1 300 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 DDX53Q86TM3 631 aaKnown RBP18■□□□□ 0.47
SMPD1-201ENST00000342245 NLRP8Q86W28 1048 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 PM20D2Q8IYS1 436 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 UFD1Q92890 307 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 SLC2A13Q96QE2 648 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 MARVELD1Q9BSK0 173 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 TAPBPLQ9BX59 468 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 NXF3Q9H4D5 531 aaKnown RBP18■□□□□ 0.47
SMPD1-201ENST00000342245 PIGVQ9NUD9 493 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 RPS6KA6Q9UK32 745 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 MYLKQ15746 1914 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 ANKRD12Q6UB98 2062 aa18■□□□□ 0.47
SMPD1-201ENST00000342245 ZNF254O75437 659 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 C9P02748 559 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 ZP3P21754 424 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 EPHA2P29317 976 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 DGKZQ13574 1117 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 BICRALQ6AI39 1079 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 IL31Q6EBC2 164 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 HSDL2Q6YN16 418 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 KDELC2Q7Z4H8 507 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 IFNL1Q8IU54 200 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 PLPP6Q8IY26 295 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 TAGAPQ8N103 731 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 ZNF431Q8TF32 576 aaPredicted RBP17.99■□□□□ 0.47
SMPD1-201ENST00000342245 QRFPRQ96P65 431 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 BARHL1Q9BZE3 327 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 FOLH1BQ9HBA9 442 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 ARNT2Q9HBZ2 717 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 CNOT2Q9NZN8 540 aaKnown RBP17.99■□□□□ 0.47
SMPD1-201ENST00000342245 SEC14L4Q9UDX3 406 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 CIB4A0PJX0 185 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 GPX5O75715 221 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 HMGN1P05114 100 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 TSPAN19P0C672 248 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 TPMTP51580 245 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 STAT5BP51692 787 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 LARS2Q15031 903 aaKnown RBP17.99■□□□□ 0.47
SMPD1-201ENST00000342245 GCNT7Q6ZNI0 430 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms