RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 CDK5RAP2Q96SN8 1893 aa12.45□□□□□ -0.42
LIN54-201ENST00000340417 BTN3A3O00478 584 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 SLC16A5O15375 505 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 EDIL3O43854 480 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 UGT2B17O75795 530 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 NOVA1P51513 510 aaKnown RBP12.44□□□□□ -0.42
LIN54-201ENST00000340417 RPS13P62277 151 aaKnown RBP12.44□□□□□ -0.42
LIN54-201ENST00000340417 RPA4Q13156 261 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 ARL13AQ5H913 290 aaPredicted RBP12.44□□□□□ -0.42
LIN54-201ENST00000340417 OTUD3Q5T2D3 398 aaPredicted RBP12.44□□□□□ -0.42
LIN54-201ENST00000340417 UNC5DQ6UXZ4 953 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 RANBP3LQ86VV4 465 aaPredicted RBP12.44□□□□□ -0.42
LIN54-201ENST00000340417 LRRN4CLQ8ND94 238 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 PEX13Q92968 403 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 ZCCHC3Q9NUD5 404 aaKnown RBP12.44□□□□□ -0.42
LIN54-201ENST00000340417 SHANK3Q9BYB0 1731 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 PIP5K1BO14986 540 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 UGT2B15P54855 530 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 SH3BGRP55822 239 aaPredicted RBP12.44□□□□□ -0.42
LIN54-201ENST00000340417 PAOXQ6QHF9 649 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 FAM220AQ7Z4H9 259 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 FAM160A2Q8N612 972 aaPredicted RBP12.44□□□□□ -0.42
LIN54-201ENST00000340417 CENPIQ92674 756 aaPredicted RBP12.44□□□□□ -0.42
LIN54-201ENST00000340417 MS4A12Q9NXJ0 267 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 PTRH2Q9Y3E5 179 aaKnown RBP12.44□□□□□ -0.42
LIN54-201ENST00000340417 R4GN57 208 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 RREB1Q92766 1687 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 TPD52L2O43399 206 aaKnown RBP12.44□□□□□ -0.42
LIN54-201ENST00000340417 SAGP10523 405 aaPredicted RBP12.44□□□□□ -0.42
LIN54-201ENST00000340417 RNH1P13489 461 aaKnown RBP12.44□□□□□ -0.42
LIN54-201ENST00000340417 PCSK2P16519 638 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 ITGB8P26012 769 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 HERVK_113P63132 956 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 CTBSQ01459 385 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 C7orf57Q8NEG2 295 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 MAP3K3Q99759 626 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 ERVK-6Q9BXR3 956 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 GPN2Q9H9Y4 310 aaPredicted RBP12.44□□□□□ -0.42
LIN54-201ENST00000340417 LAMB1P07942 1786 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 SAC3D1A6NKF1 404 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 ACOT7O00154 380 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 ABLIM1O14639 778 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 CD63P08962 238 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 C8orf89P0DMQ9 161 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 GSCP56915 257 aaPredicted RBP12.44□□□□□ -0.42
LIN54-201ENST00000340417 TYW3Q6IPR3 259 aaKnown RBP12.44□□□□□ -0.42
LIN54-201ENST00000340417 PSAPL1Q6NUJ1 521 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 HORMAD2Q8N7B1 307 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 YIPF4Q9BSR8 244 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 SPATA9Q9BWV2 254 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 ATXN10Q9UBB4 475 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 ENTPD2Q9Y5L3 495 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 CSNK1DP48730 415 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 OASLQ15646 514 aaKnown RBP12.44□□□□□ -0.42
LIN54-201ENST00000340417 JAZF1Q86VZ6 243 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 PPP1R3BQ86XI6 285 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 EPHX4Q8IUS5 362 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 ZDHHC14Q8IZN3 488 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 OSBPL7Q9BZF2 842 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 CDH22Q9UJ99 828 aa12.44□□□□□ -0.42
LIN54-201ENST00000340417 SDK1Q7Z5N4 2213 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 ANKRD31Q8N7Z5 1873 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 LOC730098B7Z3J9 87 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 GPR89AB7ZAQ6 455 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 GPR89BP0CG08 455 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 TMED10P49755 219 aaKnown RBP12.43□□□□□ -0.42
LIN54-201ENST00000340417 DEPDC1Q5TB30 811 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 ZC3HC1Q86WB0 502 aaKnown RBP12.43□□□□□ -0.42
LIN54-201ENST00000340417 CKAP2Q8WWK9 683 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 EZH1Q92800 747 aaPredicted RBP12.43□□□□□ -0.42
LIN54-201ENST00000340417 DUSP26Q9BV47 211 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 CRISPLD1Q9H336 500 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 RIBC2Q9H4K1 309 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 ACTL8Q9H568 366 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 CPNE7Q9UBL6 633 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 OR52A4PA6NMU1 304 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 WASH4PA8MWX3 477 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 PEX1O43933 1283 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 ZNF41P51814 821 aaPredicted RBP12.43□□□□□ -0.42
LIN54-201ENST00000340417 ARG2P78540 354 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 IL5RAQ01344 420 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 DEFB134Q4QY38 66 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 ANKRD46Q86W74 232 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 C2CD4AQ8NCU7 369 aaPredicted RBP12.43□□□□□ -0.42
LIN54-201ENST00000340417 OR2A12Q8NGT7 310 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 PLCL2Q9UPR0 1127 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 TNFRSF10BO14763 440 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 SPEM2Q0P670 501 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 C3orf38Q5JPI3 329 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 TP53INP2Q8IXH6 220 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 MDGA1Q8NFP4 955 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 SLC38A2Q96QD8 506 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 RANBP9Q96S59 729 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 CRB3Q9BUF7 120 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 WDR55Q9H6Y2 383 aaPredicted RBP12.43□□□□□ -0.42
LIN54-201ENST00000340417 DNMT3AQ9Y6K1 912 aaPredicted RBP12.43□□□□□ -0.42
LIN54-201ENST00000340417 POLR2AP24928 1970 aaKnown RBP12.43□□□□□ -0.42
LIN54-201ENST00000340417 PRKAR1AP10644 381 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 ARF5P84085 180 aa12.43□□□□□ -0.42
LIN54-201ENST00000340417 MRPL58Q14197 206 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms