RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 C1GALT1Q9NS00 363 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 SEMA5BQ9P283 1151 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 PDP2Q9P2J9 529 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 GVINP1Q7Z2Y8 2422 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 FRYLO94915 3013 aa17.21■□□□□ 0.35
SDCBP2-201ENST00000339987 IGKV1-8A0A0C4DH67 115 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 UGDHO60701 494 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 SNNO75324 88 aaPredicted RBP17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 RFPL3O75679 317 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 TSPAN8P19075 237 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 LSSP48449 732 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 CCNG1P51959 295 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 ABCE1P61221 599 aaKnown RBP17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 YBX1P67809 324 aaKnown RBP17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 RBBP7Q16576 425 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 PRSS42Q7Z5A4 293 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 TMPRSS11BQ86T26 416 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 TRIM73Q86UV7 250 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 LSMEM2Q8N112 164 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 L3MBTL4Q8NA19 623 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 OR4K1Q8NGD4 311 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 OR4D9Q8NGE8 314 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 OR52B6Q8NGF0 335 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 LRRC8CQ8TDW0 803 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 MAGEB10Q96LZ2 347 aaPredicted RBP17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 GFM1Q96RP9 751 aaKnown RBP17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 NUDT22Q9BRQ3 303 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 DPH7Q9BTV6 452 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 ZMYND15Q9H091 742 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 CCDC134Q9H6E4 229 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 EML4Q9HC35 981 aaKnown RBP17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 TMEM184CQ9NVA4 438 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 CUEDC1Q9NWM3 386 aaPredicted RBP17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 SNX7Q9UNH6 387 aa17.21■□□□□ 0.34
SDCBP2-201ENST00000339987 TOX3O15405 576 aaPredicted RBP17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 PRAMEF4O60810 478 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 WFS1O76024 890 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 EBLN1P0CF75 366 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 C1GALT1C1LP0DN25 315 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 CDK4P11802 303 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 CDH3P22223 829 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 ARRB2P32121 409 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 GRIA3P42263 894 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 CCR10P46092 362 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 SLC1A6P48664 564 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 CCR8P51685 355 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 IRF8Q02556 426 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 CHIT1Q13231 466 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 XKR6Q5GH73 641 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 ARL13AQ5H913 290 aaPredicted RBP17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 CATSPEREQ5SY80 951 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 PRAMEF9Q5VWM5 478 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 LIPJQ5W064 366 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 ZNF425Q6IV72 752 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 GPRIN3Q6ZVF9 776 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 FAM129CQ86XR2 697 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 FAM20CQ8IXL6 584 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 AGAP11Q8TF27 550 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 ATP6V1E2Q96A05 226 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 ZUFSPQ96AP4 578 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 GRAMD1AQ96CP6 724 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 PTCD3Q96EY7 689 aaKnown RBP17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 PPM1MQ96MI6 270 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 MAP3K3Q99759 626 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 EFCAB11Q9BUY7 163 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 ACTR8Q9H981 624 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 THAP1Q9NVV9 213 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 TOR4AQ9NXH8 423 aa17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 ATXN7L1Q9ULK2 861 aaPredicted RBP17.2■□□□□ 0.34
SDCBP2-201ENST00000339987 ZNF292O60281 2723 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 OR2A25A4D2G3 310 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 D6RAR5 112 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 PPP6CO00743 305 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 UBFD1O14562 309 aaKnown RBP17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 GIPC1O14908 333 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 CASC3O15234 703 aaKnown RBP17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 ITM2AO43736 263 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 CLDN9O95484 217 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 ESRRBO95718 433 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 HSPA4LO95757 839 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 CHRNGP07510 517 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 HOXB3P14651 431 aaPredicted RBP17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 ERVPABLB-1P60509 514 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 SH3BP2P78314 561 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 GUCY1A3Q02108 690 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 RELAQ04206 551 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 LAPTM5Q13571 262 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 SPIDRQ14159 915 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 DOC2AQ14183 400 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 GGTA1PQ4G0N0 100 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 GRHL2Q6ISB3 625 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 FIGLAQ6QHK4 219 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 FAM92BQ6ZTR7 304 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 MILR1Q7Z6M3 343 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 SYVN1Q86TM6 617 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 OR4F6Q8NGB9 312 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 TRAPPC9Q96Q05 1148 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 PLCD4Q9BRC7 762 aa17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 PITHD1Q9GZP4 211 aaPredicted RBP17.19■□□□□ 0.34
SDCBP2-201ENST00000339987 CHRNA10Q9GZZ6 450 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms