RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 OR4N4Q8N0Y3 316 aa13.54□□□□□ -0.24
COMMD4-202ENST00000338995 OR2A1Q8NGT9 310 aa13.54□□□□□ -0.24
COMMD4-202ENST00000338995 OR9A1PQ8NGU1 263 aa13.54□□□□□ -0.24
COMMD4-202ENST00000338995 LKAAEAR1Q8TD35 194 aa13.54□□□□□ -0.24
COMMD4-202ENST00000338995 BRIX1Q8TDN6 353 aaKnown RBP13.54□□□□□ -0.24
COMMD4-202ENST00000338995 METTL21AQ8WXB1 218 aa13.54□□□□□ -0.24
COMMD4-202ENST00000338995 NR4A3Q92570 626 aa13.54□□□□□ -0.24
COMMD4-202ENST00000338995 C8orf44Q96CB5 159 aa13.54□□□□□ -0.24
COMMD4-202ENST00000338995 IL22Q9GZX6 179 aa13.54□□□□□ -0.24
COMMD4-202ENST00000338995 CHST11Q9NPF2 352 aa13.54□□□□□ -0.24
COMMD4-202ENST00000338995 FAM114A2Q9NRY5 505 aa13.54□□□□□ -0.24
COMMD4-202ENST00000338995 PLA2G3Q9NZ20 509 aa13.54□□□□□ -0.24
COMMD4-202ENST00000338995 STMN3Q9NZ72 180 aa13.54□□□□□ -0.24
COMMD4-202ENST00000338995 PACSIN2Q9UNF0 486 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-202ENST00000338995 KLF2Q9Y5W3 355 aaPredicted RBP13.54□□□□□ -0.24
COMMD4-202ENST00000338995 PCM1Q15154 2024 aa13.54□□□□□ -0.24
COMMD4-202ENST00000338995 CELSR2Q9HCU4 2923 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 TRGV8A0A0C4DH27 118 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 IDSB3KWA1 339 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 H0YGG7 62 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 RASAL1O95294 804 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 FTCDO95954 541 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 CHRM3P20309 590 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 BDKRB1P46663 353 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 EIF3BP55884 814 aaKnown RBP13.53□□□□□ -0.24
COMMD4-202ENST00000338995 SESN2P58004 480 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-202ENST00000338995 ARF3P61204 181 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-202ENST00000338995 DSG2Q14126 1118 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 ARHGAP19Q14CB8 494 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 NDUFA9Q16795 377 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 PRTGQ2VWP7 1150 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 RNF187Q5TA31 235 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-202ENST00000338995 ZNF324BQ6AW86 544 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-202ENST00000338995 RAD9BQ6WBX8 426 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 LAPTM4BQ86VI4 370 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 MCEMP1Q8IX19 187 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 RNF10Q8N5U6 811 aaKnown RBP13.53□□□□□ -0.24
COMMD4-202ENST00000338995 CSNK1A1LQ8N752 337 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 ACRBPQ8NEB7 543 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 ATG4AQ8WYN0 398 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 MMABQ96EY8 250 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-202ENST00000338995 HES6Q96HZ4 224 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 TCF12Q99081 682 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 BAG1Q99933 345 aaPredicted RBP13.53□□□□□ -0.24
COMMD4-202ENST00000338995 PLCD4Q9BRC7 762 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 P2RY12Q9H244 342 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 VPS9D1Q9Y2B5 631 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 REXO2Q9Y3B8 237 aaKnown RBP13.53□□□□□ -0.24
COMMD4-202ENST00000338995 NFS1Q9Y697 457 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 CRYBG3Q68DQ2 2970 aa13.53□□□□□ -0.24
COMMD4-202ENST00000338995 TCRBV7S2A1N4TA0A589 114 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 OR2A25A4D2G3 310 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 CCL21O00585 134 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 MLYCDO95822 493 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 ESR1P03372 595 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 CATP04040 527 aaKnown RBP13.52□□□□□ -0.25
COMMD4-202ENST00000338995 COX6A1P12074 109 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 PSMB5P28074 263 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 ATP5DP30049 168 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 FMO4P31512 558 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 SOX11P35716 441 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 KCNK10P57789 538 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 RELAQ04206 551 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 SNX1Q13596 522 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 TSTA3Q13630 321 aaPredicted RBP13.52□□□□□ -0.25
COMMD4-202ENST00000338995 OASLQ15646 514 aaKnown RBP13.52□□□□□ -0.25
COMMD4-202ENST00000338995 RPTNQ6XPR3 784 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 SIRT6Q8N6T7 355 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 MCOLN3Q8TDD5 553 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 PSMF1Q92530 271 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 EBNA1BP2Q99848 306 aaKnown RBP13.52□□□□□ -0.25
COMMD4-202ENST00000338995 TUBB6Q9BUF5 446 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 ACAT2Q9BWD1 397 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 TSGA10Q9BZW7 698 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 TGIF2Q9GZN2 237 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 RNF32Q9H0A6 362 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 EIF2B3Q9NR50 452 aaKnown RBP13.52□□□□□ -0.25
COMMD4-202ENST00000338995 ABI3Q9P2A4 366 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 MARCH4Q9P2E8 410 aaPredicted RBP13.52□□□□□ -0.25
COMMD4-202ENST00000338995 SEC14L3Q9UDX4 400 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 NUP210LQ5VU65 1888 aa13.52□□□□□ -0.25
COMMD4-202ENST00000338995 IGHV1-45A0A0A0MS14 117 aa13.51□□□□□ -0.25
COMMD4-202ENST00000338995 A0A1W2PQ72 361 aa13.51□□□□□ -0.25
COMMD4-202ENST00000338995 E5RI56 91 aa13.51□□□□□ -0.25
COMMD4-202ENST00000338995 UNC5CO95185 931 aa13.51□□□□□ -0.25
COMMD4-202ENST00000338995 MATN4O95460 622 aa13.51□□□□□ -0.25
COMMD4-202ENST00000338995 SLC26A3P40879 764 aa13.51□□□□□ -0.25
COMMD4-202ENST00000338995 AVPR1BP47901 424 aa13.51□□□□□ -0.25
COMMD4-202ENST00000338995 ABATP80404 500 aa13.51□□□□□ -0.25
COMMD4-202ENST00000338995 SARNPP82979 210 aaKnown RBP13.51□□□□□ -0.25
COMMD4-202ENST00000338995 EEF1A2Q05639 463 aaKnown RBP13.51□□□□□ -0.25
COMMD4-202ENST00000338995 PRDX1Q06830 199 aaKnown RBP13.51□□□□□ -0.25
COMMD4-202ENST00000338995 FAM53BQ14153 422 aa13.51□□□□□ -0.25
COMMD4-202ENST00000338995 ZXDCQ2QGD7 858 aaPredicted RBP13.51□□□□□ -0.25
COMMD4-202ENST00000338995 CCSMST1Q4G0I0 132 aa13.51□□□□□ -0.25
COMMD4-202ENST00000338995 FAAH2Q6GMR7 532 aa13.51□□□□□ -0.25
COMMD4-202ENST00000338995 LRRC8BQ6P9F7 803 aa13.51□□□□□ -0.25
COMMD4-202ENST00000338995 XKRXQ6PP77 449 aa13.51□□□□□ -0.25
COMMD4-202ENST00000338995 GSTA5Q7RTV2 222 aa13.51□□□□□ -0.25
COMMD4-202ENST00000338995 MRGPRGQ86SM5 289 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms