RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 NCF4Q15080 339 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 UGT8Q16880 541 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 ZC3H12BQ5HYM0 836 aaKnown RBP14.61□□□□□ -0.07
PRKN-201ENST00000338468 C8orf74Q6P047 294 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 C3orf62Q6ZUJ4 267 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 SYVN1Q86TM6 617 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 CEP97Q8IW35 865 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 PALM2Q8IXS6 379 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 MYO1HQ8N1T3 1032 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 MMGT1Q8N4V1 131 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 PROKR1Q8TCW9 393 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 MCOLN3Q8TDD5 553 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 ADAMTS17Q8TE56 1095 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 PDLIM5Q96HC4 596 aaKnown RBP14.61□□□□□ -0.07
PRKN-201ENST00000338468 VPS39Q96JC1 886 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 CCDC138Q96M89 665 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 SELENOSQ9BQE4 189 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 SLC7A5P2Q9GIP4 190 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 RHOJQ9H4E5 214 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 MRPS30Q9NP92 439 aaKnown RBP14.61□□□□□ -0.07
PRKN-201ENST00000338468 CUEDC1Q9NWM3 386 aaPredicted RBP14.61□□□□□ -0.07
PRKN-201ENST00000338468 GEMIN8Q9NWZ8 242 aaKnown RBP14.61□□□□□ -0.07
PRKN-201ENST00000338468 TCFL5Q9UL49 500 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 SRPK3Q9UPE1 567 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 KCNMB2Q9Y691 235 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 HEATR5BQ9P2D3 2071 aa14.61□□□□□ -0.07
PRKN-201ENST00000338468 A0A0J9YVX5 310 aa14.6□□□□□ -0.07
PRKN-201ENST00000338468 CNOT3O75175 753 aaKnown RBP14.6□□□□□ -0.07
PRKN-201ENST00000338468 KLF7O75840 302 aaPredicted RBP14.6□□□□□ -0.07
PRKN-201ENST00000338468 WISP3O95389 354 aaPredicted RBP14.6□□□□□ -0.07
PRKN-201ENST00000338468 ZNF37AP17032 561 aaPredicted RBP14.6□□□□□ -0.07
PRKN-201ENST00000338468 MAGEA4P43358 317 aa14.6□□□□□ -0.07
PRKN-201ENST00000338468 CCR10P46092 362 aa14.6□□□□□ -0.07
PRKN-201ENST00000338468 VSX2P58304 361 aaPredicted RBP14.6□□□□□ -0.07
PRKN-201ENST00000338468 WASHC2DQ5SRD0 308 aa14.6□□□□□ -0.07
PRKN-201ENST00000338468 SBSNQ6UWP8 590 aa14.6□□□□□ -0.07
PRKN-201ENST00000338468 DTWD1Q8N5C7 304 aa14.6□□□□□ -0.07
PRKN-201ENST00000338468 NDC1Q9BTX1 674 aa14.6□□□□□ -0.07
PRKN-201ENST00000338468 SLC25A18Q9H1K4 315 aa14.6□□□□□ -0.07
PRKN-201ENST00000338468 LRRC4CQ9HCJ2 640 aa14.6□□□□□ -0.07
PRKN-201ENST00000338468 IRAK4Q9NWZ3 460 aa14.6□□□□□ -0.07
PRKN-201ENST00000338468 NSMCE4AQ9NXX6 385 aa14.6□□□□□ -0.07
PRKN-201ENST00000338468 ANKMY1Q9P2S6 941 aa14.6□□□□□ -0.07
PRKN-201ENST00000338468 DMGDHQ9UI17 866 aaKnown RBP14.6□□□□□ -0.07
PRKN-201ENST00000338468 SH2B3Q9UQQ2 575 aa14.6□□□□□ -0.07
PRKN-201ENST00000338468 MTO1Q9Y2Z2 717 aaKnown RBP14.6□□□□□ -0.07
PRKN-201ENST00000338468 SRPX2O60687 465 aaPredicted RBP14.59□□□□□ -0.07
PRKN-201ENST00000338468 ONECUT2O95948 504 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 GSTA2P09210 222 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 AGXTP21549 392 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 SAT1P21673 171 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 FOXL2P58012 376 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 TBPL1P62380 186 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 DCDP81605 110 aaKnown RBP14.59□□□□□ -0.07
PRKN-201ENST00000338468 PPP1R3AQ16821 1122 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 NKAIN1Q4KMZ8 207 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 TCTE1Q5JU00 501 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 MRPL14Q6P1L8 145 aaKnown RBP14.59□□□□□ -0.07
PRKN-201ENST00000338468 AGTRAPQ6RW13 159 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 TTLL10Q6ZVT0 673 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 COX15Q7KZN9 410 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 CCDC25Q86WR0 208 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 ANKRD49Q8WVL7 239 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 APOBEC4Q8WW27 367 aaKnown RBP14.59□□□□□ -0.07
PRKN-201ENST00000338468 OR2A5Q96R48 311 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 ZFYVE21Q9BQ24 234 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 SGPP1Q9BX95 441 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 ATG10Q9H0Y0 220 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 ADNPQ9H2P0 1102 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 CUTCQ9NTM9 273 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 ABCF3Q9NUQ8 709 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 POLHQ9Y253 713 aa14.59□□□□□ -0.07
PRKN-201ENST00000338468 A0A1B0GX78 115 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 H0YGG7 62 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 DSCR3O14972 297 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 CCNDBP1O95273 360 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 TUBB4AP04350 444 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 ARSFP54793 590 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 ARF3P61204 181 aaPredicted RBP14.58□□□□□ -0.08
PRKN-201ENST00000338468 ABATP80404 500 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 RELAQ04206 551 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 KCNAB2Q13303 367 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 NAE1Q13564 534 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 GRM7Q14831 915 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 SLC9A5Q14940 896 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 NAA25Q14CX7 972 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 PRTGQ2VWP7 1150 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 UBAP2Q5T6F2 1119 aaKnown RBP14.58□□□□□ -0.08
PRKN-201ENST00000338468 PRAMEF13Q5VWM6 474 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 MLIPQ5VWP3 458 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 ARHGEF39Q8N4T4 335 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.58□□□□□ -0.08
PRKN-201ENST00000338468 C10orf90Q96M02 699 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 RBBP8Q99708 897 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 CPNE1Q99829 537 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 DHRS4Q9BTZ2 278 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 CAB39LQ9H9S4 337 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 CCDC177Q9NQR7 707 aaPredicted RBP14.58□□□□□ -0.08
PRKN-201ENST00000338468 TXLNGQ9NUQ3 528 aa14.58□□□□□ -0.08
PRKN-201ENST00000338468 SNX7Q9UNH6 387 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms