RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 SGSHP51688 502 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 SPIN4Q56A73 249 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 DEF8Q6ZN54 512 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 TRAM1L1Q8N609 369 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 PIH1D2Q8WWB5 315 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 RERGQ96A58 199 aaPredicted RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 RAB7BQ96AH8 199 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 RAB11FIP5Q9BXF6 653 aa6.12□□□□□ -1.43
PRKDC-202ENST00000338368 REXO4Q9GZR2 422 aaKnown RBP6.12□□□□□ -1.43
PRKDC-202ENST00000338368 DICER1Q9UPY3 1922 aaKnown RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 C1GALT1C1LP0DN25 315 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 GRM2Q14416 872 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 GCNT6Q5T4J0 391 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 LIPJQ5W064 366 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 NOXRED1Q6NXP6 359 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 ZNF513Q8N8E2 541 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 OR5AK3PQ8NH89 298 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 FAM81AQ8TBF8 368 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 SLC30A3Q99726 388 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 CARS2Q9HA77 564 aaKnown RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 ATP6V1HQ9UI12 483 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 NME4O00746 187 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 ERVFC1P60507 584 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 RPS13P62277 151 aaKnown RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 SATB2Q9UPW6 733 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 TRMUO75648 421 aaKnown RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 CTSKP43235 329 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 GAREM2Q75VX8 874 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 TTC29Q8NA56 475 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 KLHL3Q9UH77 587 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 PDE10AQ9Y233 779 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 KCNK6Q9Y257 313 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 PCDHGA7Q9Y5G6 932 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 JUPP14923 745 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 HSD17B2P37059 387 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 NADK2Q4G0N4 442 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 CXorf57Q6NSI4 855 aaKnown RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 SUSD1Q6UWL2 747 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 PTCHD4Q6ZW05 846 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 ERN2Q76MJ5 926 aaKnown RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 TMEM145Q8NBT3 493 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 SLC38A4Q969I6 547 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 ZHX1-C8orf76Q96EF9 292 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 CCM2LQ9NUG4 571 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 RBBP6Q7Z6E9 1792 aaKnown RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 M0QX08 132 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 MYL12BO14950 172 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 PDPK1O15530 556 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 RGS10O43665 173 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 SLC16A8O95907 504 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 CASP9P55211 416 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 OGFRL1Q5TC84 451 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 NUDT13Q86X67 352 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 ANKLE1Q8NAG6 615 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 Q96MT0 163 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 IRF2BPLQ9H1B7 796 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 DAPK2Q9UIK4 370 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 ITM2BQ9Y287 266 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 LRRC72A6NJI9 287 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 OR10H2O60403 315 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 IFNA16P05015 189 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 PFKLP17858 780 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 NOS3P29474 1203 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 HLA-FP30511 346 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 MAGEA12P43365 314 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 UBE3AQ05086 875 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 SLC9A5Q14940 896 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 GALNT18Q6P9A2 607 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 ZNF483Q8TF39 744 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 NODALQ96S42 347 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 GAS2L1Q99501 681 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 PLGRKTQ9HBL7 147 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 ZCCHC3Q9NUD5 404 aaKnown RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 DDX28Q9NUL7 540 aaKnown RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 RHBDL2Q9NX52 303 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 BCORQ6W2J9 1755 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 PRKACGP22612 351 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 CPOXP36551 454 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 KCNC1P48547 511 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 OGFOD2Q6N063 350 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 NPAS3Q8IXF0 933 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 OR10Q1Q8NGQ4 319 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 ZBED6CLQ96FA7 236 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 CPEB1Q9BZB8 566 aaKnown RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 BTBD1Q9H0C5 482 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 SRMSQ9H3Y6 488 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 SDR39U1Q9NRG7 319 aaPredicted RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 ZDHHC7Q9NXF8 308 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 VEGFDO43915 354 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 RSL1D1O76021 490 aaKnown RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 KDELR2P33947 212 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 STXBP1P61764 594 aaKnown RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 RAB30Q15771 203 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 TIMM50Q3ZCQ8 353 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 LIPIQ6XZB0 460 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 MACC1Q6ZN28 852 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 MRPS30Q9NP92 439 aaKnown RBP6.11□□□□□ -1.43
PRKDC-202ENST00000338368 CD320Q9NPF0 282 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 CLDND1Q9NY35 253 aa6.11□□□□□ -1.43
PRKDC-202ENST00000338368 FBXL21Q9UKT6 434 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms