RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 CEACAM20Q6UY09 585 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 ADCK2Q7Z695 626 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 MCATQ8IVS2 390 aaKnown RBP11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 DNAJC22Q8N4W6 341 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 PTGR2Q8N8N7 351 aaPredicted RBP11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 BANPQ8N9N5 519 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 SNX31Q8N9S9 440 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 CCDC63Q8NA47 563 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 OR8K5Q8NH50 307 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 ESAMQ96AP7 390 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 NXPE2Q96DL1 559 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 CCDC126Q96EE4 140 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 SLC46A1Q96NT5 459 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 PRAP1Q96NZ9 151 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 OR6C1Q96RD1 312 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 PLCD4Q9BRC7 762 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 ZPBPQ9BS86 351 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 B3GNT4Q9C0J1 378 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 VIPAS39Q9H9C1 493 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 FGF21Q9NSA1 209 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 GPRC5BQ9NZH0 403 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 OPTCQ9UBM4 332 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 MID2Q9UJV3 735 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 RARRES3Q9UL19 164 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 UNC13CQ8NB66 2214 aa11.45□□□□□ -0.58
SPTLC1-202ENST00000337841 STX16-NPEPL1H3BU86 382 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 K7EPI3 171 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 STX16O14662 325 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 SRPX2O60687 465 aaPredicted RBP11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 PRAMEF10O60809 474 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 MSL3P1P0C860 447 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 EBLN1P0CF75 366 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 HGFP14210 728 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 EPB42P16452 691 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 ATP5F1P24539 256 aaPredicted RBP11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 CXCR2P25025 360 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 PIK3CGP48736 1102 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 SH3BP2P78314 561 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 CDC16Q13042 620 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 TUBB3Q13509 450 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 KCNAB1Q14722 419 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 PCBP2Q15366 365 aaKnown RBP eCLIP11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 ZIC1Q15915 447 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 PDK4Q16654 411 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 FCRL6Q6DN72 434 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 FBXO42Q6P3S6 717 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 NXPE4Q6UWF7 544 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 CDHR3Q6ZTQ4 885 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 LRRC70Q7Z2Q7 622 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 EXOC3L1Q86VI1 746 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 SLC22A9Q8IVM8 553 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 TMEM151AQ8N4L1 468 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 GOLGA6L1Q8N7Z2 621 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 ABHD11Q8NFV4 315 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 RDH11Q8TC12 318 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 UBTD2Q8WUN7 234 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 SLC5A11Q8WWX8 675 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 USP7Q93009 1102 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 PHF21BQ96EK2 531 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 APOPT1Q96IL0 206 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 FCRL4Q96PJ5 515 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 TEFMQ96QE5 360 aaKnown RBP11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 OR4K3Q96R72 315 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 TMEM79Q9BSE2 394 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 DDA1Q9BW61 102 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 ACBD3Q9H3P7 528 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 TMBIM4Q9HC24 238 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 FAM60AQ9NP50 221 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 SLC6A20Q9NP91 592 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 MKS1Q9NXB0 559 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 SIDT1Q9NXL6 827 aaKnown RBP11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 PLLPQ9Y342 182 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 ACTL7BQ9Y614 415 aa11.44□□□□□ -0.58
SPTLC1-202ENST00000337841 MED19A0JLT2 244 aaPredicted RBP11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 OR2A25A4D2G3 310 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 TK2O00142 265 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 NVLO15381 856 aaKnown RBP11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 PLIN3O60664 434 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 SPAG7O75391 227 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 KATNA1O75449 491 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 PROCP04070 461 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 C1GALT1C1LP0DN25 315 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 MYL2P10916 166 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 FGF5P12034 268 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 CDH1P12830 882 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 CPA3P15088 417 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 EZRP15311 586 aaKnown RBP11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 ITIH1P19827 911 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 AGTR2P50052 363 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 YBX1P67809 324 aaKnown RBP11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 CSNK1G2P78368 415 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 FOXK2Q01167 660 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 GPR19Q15760 415 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 HIST2H2ACQ16777 129 aaPredicted RBP11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 FBXO48Q5FWF7 155 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 TCTE1Q5JU00 501 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 HIST2H2AA3Q6FI13 130 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 ZNF425Q6IV72 752 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 IGF2-ASQ6U949 168 aa11.43□□□□□ -0.58
SPTLC1-202ENST00000337841 PAQR7Q86WK9 346 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms