RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 CEP97Q8IW35 865 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 ULK2Q8IYT8 1036 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 ACVR1CQ8NER5 493 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 AKTIPQ9H8T0 292 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 SUCOQ9UBS9 1254 aaKnown RBP9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 DHRS12A0PJE2 317 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 ELOVL7A1L3X0 281 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 COQ9O75208 318 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 CSNK2A2P19784 350 aaPredicted RBP9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 MMP12P39900 470 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 RGRP47804 291 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 KCNC1P48547 511 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 BTN3A2P78410 334 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 SLC34A1Q06495 639 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 HSPB3Q12988 150 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 NFATC4Q14934 902 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 TOR1AIP1Q5JTV8 583 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 ARHGAP40Q5TG30 622 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 PDZD3Q86UT5 571 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 PLD6Q8N2A8 252 aaKnown RBP9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 KCNC2Q96PR1 638 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 OLFM1Q99784 485 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 SLC12A9Q9BXP2 914 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 MTG2Q9H4K7 406 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 ENTPD2Q9Y5L3 495 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 RSL1D1O76021 490 aaKnown RBP9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 JMJD7P0C870 316 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 GSTM2P28161 218 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 ECHS1P30084 290 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 ZNF33BQ06732 778 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 MTX3Q5HYI7 312 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 FAAH2Q6GMR7 532 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 C17orf62Q9BQA9 187 aa9.04□□□□□ -0.96
FNDC3B-201ENST00000336824 ZNF646O15015 1829 aaPredicted RBP9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 SAP18O00422 153 aaKnown RBP9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 CAPN5O15484 640 aaPredicted RBP9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 MATN4O95460 622 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 KLK1P06870 262 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 UMPSP11172 480 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 ATP5A1P25705 553 aaKnown RBP9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 ITGB8P26012 769 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 IL12BP29460 328 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 PRLHRP49683 370 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 NR1D2Q14995 579 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 HKDC1Q2TB90 917 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 TMEM35AQ53FP2 167 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 OR2L2Q8NH16 312 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 HSPA12BQ96MM6 686 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 TXLNGYQ9BZA5 131 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 EXO5Q9H790 373 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 ZDHHC2Q9UIJ5 367 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 FADS3Q9Y5Q0 445 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 PRSS38A1L453 326 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 A8MU76 341 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 F7P08709 466 aaPredicted RBP9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 GDF5P43026 501 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 OR52L1Q8NGH7 329 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 H3BN98 237 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 LINC01565O15544 149 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 NCBP2P52298 156 aaKnown RBP eCLIP9.03□□□□□ -0.964e-11■■■□□ 18.5
FNDC3B-201ENST00000336824 TAS2R41P59536 307 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 ADAMTSL4Q6UY14 1074 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 PIGWQ7Z7B1 504 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 FBXO15Q8NCQ5 510 aaPredicted RBP9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 DDHD1Q8NEL9 900 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 SLC9A6Q92581 669 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 C17orf113A0A1B0GUU1 675 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 HTRA2O43464 458 aaPredicted RBP9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 NRG3P56975 720 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 EMX2Q04743 252 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 STK32CQ86UX6 486 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 TMEM126BQ8IUX1 230 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 B4GALNT2Q8NHY0 566 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 PIH1D2Q8WWB5 315 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 BOCQ9BWV1 1114 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 ATXN10Q9UBB4 475 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 ITM2AO43736 263 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 DFNA5O60443 496 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 SERPINB10P48595 397 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 AFF3P51826 1226 aaKnown RBP9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 BIKQ13323 160 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 SIM2Q14190 667 aaPredicted RBP9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 C1orf52Q8N6N3 182 aaKnown RBP9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 SLC35G5Q96KT7 338 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 CNBD2Q96M20 576 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 MMP17Q9ULZ9 603 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 SUFUQ9UMX1 484 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 RNF11Q9Y3C5 154 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 WASH3PC4AMC7 463 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 H7C0S8 307 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 UGDHO60701 494 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 C1SP09871 688 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 RPS7P62081 194 aaKnown RBP9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 RPS13P62277 151 aaKnown RBP9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 ZNF763Q0D2J5 394 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 XAGE5Q8WWM1 108 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 FNDC11Q9BVV2 318 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 STOML2Q9UJZ1 356 aa9.03□□□□□ -0.96
FNDC3B-201ENST00000336824 PRLP01236 227 aa9.02□□□□□ -0.96
FNDC3B-201ENST00000336824 CCR2P41597 374 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms