RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 ITPAQ9BY32 194 aa12.78□□□□□ -0.36
HLCS-201ENST00000336648 SDHAF3Q9NRP4 125 aa12.78□□□□□ -0.36
HLCS-201ENST00000336648 H0YGN5 161 aa12.78□□□□□ -0.36
HLCS-201ENST00000336648 GABBR2O75899 941 aa12.78□□□□□ -0.36
HLCS-201ENST00000336648 ZBTB48P10074 688 aaPredicted RBP12.78□□□□□ -0.36
HLCS-201ENST00000336648 ZNF267Q14586 743 aaPredicted RBP12.78□□□□□ -0.36
HLCS-201ENST00000336648 FASTKD3Q14CZ7 662 aaKnown RBP12.78□□□□□ -0.36
HLCS-201ENST00000336648 ALG10Q5BKT4 473 aa12.78□□□□□ -0.36
HLCS-201ENST00000336648 C10orf62Q5T681 223 aaPredicted RBP12.78□□□□□ -0.36
HLCS-201ENST00000336648 ZNF627Q7L945 461 aa12.78□□□□□ -0.36
HLCS-201ENST00000336648 GALNT12Q8IXK2 581 aa12.78□□□□□ -0.36
HLCS-201ENST00000336648 TOMM5Q8N4H5 51 aa12.78□□□□□ -0.36
HLCS-201ENST00000336648 ATP6V1C2Q8NEY4 427 aa12.78□□□□□ -0.36
HLCS-201ENST00000336648 RHBDF1Q96CC6 855 aa12.78□□□□□ -0.36
HLCS-201ENST00000336648 WRAP53Q9BUR4 548 aaKnown RBP12.78□□□□□ -0.36
HLCS-201ENST00000336648 TMEM9Q9P0T7 183 aa12.78□□□□□ -0.36
HLCS-201ENST00000336648 COMMD3Q9UBI1 195 aa12.78□□□□□ -0.36
HLCS-201ENST00000336648 COQ4Q9Y3A0 265 aa12.78□□□□□ -0.36
HLCS-201ENST00000336648 ZNF670-ZNF695F2Z2N8 137 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 STMND1H3BQB6 276 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 KLF11O14901 512 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 H1F0P07305 194 aaKnown RBP12.77□□□□□ -0.36
HLCS-201ENST00000336648 CXCR1P25024 350 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 ACADVLP49748 655 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 NFKB2Q00653 900 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 ARFRP1Q13795 201 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 SMYD5Q6GMV2 418 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 SLC8B1Q6J4K2 584 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 VITQ6UXI7 678 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 LINGO4Q6UY18 593 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 ZNF517Q6ZMY9 492 aaPredicted RBP12.77□□□□□ -0.36
HLCS-201ENST00000336648 ANKRD46Q86W74 232 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 SLC22A15Q8IZD6 547 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 ZCCHC10Q8TBK6 192 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 ABCD2Q9UBJ2 740 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 FCF1Q9Y324 198 aaKnown RBP12.77□□□□□ -0.36
HLCS-201ENST00000336648 TIMM8BQ9Y5J9 83 aaPredicted RBP12.77□□□□□ -0.36
HLCS-201ENST00000336648 PSMD9O00233 223 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 FLT3LGP49771 235 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 INAVAQ3KP66 663 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 VARS2Q5ST30 1063 aaKnown RBP12.77□□□□□ -0.36
HLCS-201ENST00000336648 PRPF38BQ5VTL8 546 aaKnown RBP12.77□□□□□ -0.36
HLCS-201ENST00000336648 LHFPL3Q86UP9 236 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 C2orf73Q8N5S3 287 aaPredicted RBP12.77□□□□□ -0.36
HLCS-201ENST00000336648 C7orf57Q8NEG2 295 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 PSMG2Q969U7 264 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 NUS1Q96E22 293 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 NEDD4LQ96PU5 975 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 SLC32A1Q9H598 525 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 GOLGA2P5Q9HBQ8 144 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 HHATLQ9HCP6 504 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 ZCCHC3Q9NUD5 404 aaKnown RBP12.77□□□□□ -0.36
HLCS-201ENST00000336648 TNFRSF10DQ9UBN6 386 aa12.77□□□□□ -0.36
HLCS-201ENST00000336648 WNT9AO14904 365 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 CLCNKBP51801 687 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 ADAM15Q13444 863 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 NIPAL1Q6NVV3 410 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 SMARCD3Q6STE5 483 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 LDB1Q86U70 411 aaPredicted RBP12.77□□□□□ -0.37
HLCS-201ENST00000336648 PAQR7Q86WK9 346 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 LGI4Q8N135 537 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 C10orf82Q8WW14 230 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 CCDC120Q96HB5 630 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 DPEP2Q9H4A9 486 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 EBF3Q9H4W6 596 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 MCCC2Q9HCC0 563 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 DTLQ9NZJ0 730 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 SPATA31D1Q6ZQQ2 1576 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 KIF20BQ96Q89 1820 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 LGR5O75473 907 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 GPR153Q6NV75 609 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 NRSN1Q8IZ57 195 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 CLIP4Q8N3C7 705 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 TBL1XR1Q9BZK7 514 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 DMAC2Q9NW81 257 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 CYTH4Q9UIA0 394 aa12.77□□□□□ -0.37
HLCS-201ENST00000336648 OR4Q2P0C623 313 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 AHCYP23526 432 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 ZNF33AQ06730 810 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 DSC3Q14574 896 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 NPTX1Q15818 432 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 BPIFB1Q8TDL5 484 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 C1orf21Q9H246 121 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 WASF3Q9UPY6 502 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 CLCA1A8K7I4 914 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 IQCF5A8MTL0 148 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 TNFRSF10BO14763 440 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 VNN2O95498 520 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 OR2T5Q6IEZ7 315 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 PDE12Q6L8Q7 609 aaKnown RBP12.76□□□□□ -0.37
HLCS-201ENST00000336648 BRAT1Q6PJG6 821 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 COMTD1Q86VU5 262 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 TMEM126BQ8IUX1 230 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 SLC37A3Q8NCC5 494 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 OR56A1Q8NGH5 318 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 OR6K6Q8NGW6 343 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 OR2T29Q8NH02 315 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 NDC1Q9BTX1 674 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 TBCCD1Q9NVR7 557 aa12.76□□□□□ -0.37
HLCS-201ENST00000336648 SLC39A1Q9NY26 324 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms