RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 CLDN9O95484 217 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 FGF4P08620 206 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 KITP10721 976 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 CKMT1AP12532 417 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 ALDH4A1P30038 563 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 GPR3P46089 330 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 RPL14P50914 215 aaKnown RBP20.71■□□□□ 0.91
TPM1-204ENST00000334895 IRF8Q02556 426 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 SF1Q15637 639 aaKnown RBP20.71■□□□□ 0.91
TPM1-204ENST00000334895 XKR6Q5GH73 641 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 NKAIN2Q5VXU1 208 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 NXPE4Q6UWF7 544 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 TRIM73Q86UV7 250 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 CDYL2Q8N8U2 506 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 PPM1MQ96MI6 270 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 SPNS1Q9H2V7 528 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 RABEP2Q9H5N1 569 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 EVA1BQ9NVM1 165 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 TRAF6Q9Y4K3 522 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 ENTPD2Q9Y5L3 495 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 CEP250Q9BV73 2442 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.71■□□□□ 0.91
TPM1-204ENST00000334895 CPED1A4D0V7 1026 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 SRRM3A6NNA2 597 aaPredicted RBP20.71■□□□□ 0.91
TPM1-204ENST00000334895 C2orf74A8MZ97 194 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 NRP2O60462 931 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 FOXD2O60548 495 aaPredicted RBP20.71■□□□□ 0.91
TPM1-204ENST00000334895 PNLIPP16233 465 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 AMD1P17707 334 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 ARL1P40616 181 aaPredicted RBP20.71■□□□□ 0.91
TPM1-204ENST00000334895 CASP2P42575 452 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 LSSP48449 732 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 SLC14A1Q13336 389 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 UGT3A2Q3SY77 523 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 GGTA1PQ4G0N0 100 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 TCHHL1Q5QJ38 904 aaPredicted RBP20.71■□□□□ 0.91
TPM1-204ENST00000334895 KIAA1614Q5VZ46 1190 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 KANK2Q63ZY3 851 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 ATG9BQ674R7 924 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 SPRED1Q7Z699 444 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 Q8N9G6 341 aaPredicted RBP20.71■□□□□ 0.91
TPM1-204ENST00000334895 ABHD11Q8NFV4 315 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 OR6C4Q8NGE1 309 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 PIWIL2Q8TC59 973 aaKnown RBP20.71■□□□□ 0.91
TPM1-204ENST00000334895 SLC22A18Q96BI1 424 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 ABCG4Q9H172 646 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 EPN3Q9H201 632 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 TRPS1Q9UHF7 1281 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 POMT2Q9UKY4 750 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 FIS1Q9Y3D6 152 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 TIMM22Q9Y584 194 aa20.71■□□□□ 0.91
TPM1-204ENST00000334895 AZIN1O14977 448 aa20.7■□□□□ 0.9
TPM1-204ENST00000334895 UGDHO60701 494 aa20.7■□□□□ 0.9
TPM1-204ENST00000334895 CAPN1P07384 714 aa20.7■□□□□ 0.9
TPM1-204ENST00000334895 C1GALT1C1LP0DN25 315 aa20.7■□□□□ 0.9
TPM1-204ENST00000334895 SERPINB3P29508 390 aa20.7■□□□□ 0.9
TPM1-204ENST00000334895 TBCCQ15814 346 aa20.7■□□□□ 0.9
TPM1-204ENST00000334895 SPESP1Q6UW49 350 aa20.7■□□□□ 0.9
TPM1-204ENST00000334895 MAVSQ7Z434 540 aa20.7■□□□□ 0.9
TPM1-204ENST00000334895 FAM129CQ86XR2 697 aa20.7■□□□□ 0.9
TPM1-204ENST00000334895 EHD1Q9H4M9 534 aa20.7■□□□□ 0.9
TPM1-204ENST00000334895 MRPS30Q9NP92 439 aaKnown RBP20.7■□□□□ 0.9
TPM1-204ENST00000334895 GEMIN8Q9NWZ8 242 aaKnown RBP20.7■□□□□ 0.9
TPM1-204ENST00000334895 KLHL20Q9Y2M5 609 aa20.7■□□□□ 0.9
TPM1-204ENST00000334895 C4orf47A7E2U8 309 aa20.69■□□□□ 0.9
TPM1-204ENST00000334895 H7BY64 318 aa20.69■□□□□ 0.9
TPM1-204ENST00000334895 ZNF195O14628 629 aa20.69■□□□□ 0.9
TPM1-204ENST00000334895 JUNP05412 331 aaKnown RBP20.69■□□□□ 0.9
TPM1-204ENST00000334895 ABATP80404 500 aa20.69■□□□□ 0.9
TPM1-204ENST00000334895 MEF2AQ02078 507 aaPredicted RBP20.69■□□□□ 0.9
TPM1-204ENST00000334895 CFHR1Q03591 330 aa20.69■□□□□ 0.9
TPM1-204ENST00000334895 INAVAQ3KP66 663 aa20.69■□□□□ 0.9
TPM1-204ENST00000334895 LIPJQ5W064 366 aa20.69■□□□□ 0.9
TPM1-204ENST00000334895 KLHL35Q6PF15 583 aa20.69■□□□□ 0.9
TPM1-204ENST00000334895 EFL1Q7Z2Z2 1120 aaKnown RBP20.69■□□□□ 0.9
TPM1-204ENST00000334895 MYLK4Q86YV6 388 aaPredicted RBP20.69■□□□□ 0.9
TPM1-204ENST00000334895 CLYBLQ8N0X4 340 aa20.69■□□□□ 0.9
TPM1-204ENST00000334895 OR4K1Q8NGD4 311 aa20.69■□□□□ 0.9
TPM1-204ENST00000334895 RHBDD1Q8TEB9 315 aa20.69■□□□□ 0.9
TPM1-204ENST00000334895 THOC1Q96FV9 657 aaKnown RBP20.69■□□□□ 0.9
TPM1-204ENST00000334895 PRAP1Q96NZ9 151 aa20.69■□□□□ 0.9
TPM1-204ENST00000334895 FAM107BQ9H098 131 aa20.69■□□□□ 0.9
TPM1-204ENST00000334895 PELI2Q9HAT8 420 aa20.69■□□□□ 0.9
TPM1-204ENST00000334895 DNAJC15Q9Y5T4 150 aa20.69■□□□□ 0.9
TPM1-204ENST00000334895 GIPC1O14908 333 aa20.68■□□□□ 0.9
TPM1-204ENST00000334895 SH3BP5O60239 455 aa20.68■□□□□ 0.9
TPM1-204ENST00000334895 ENO1P06733 434 aaKnown RBP20.68■□□□□ 0.9
TPM1-204ENST00000334895 HGFP14210 728 aa20.68■□□□□ 0.9
TPM1-204ENST00000334895 JUPP14923 745 aa20.68■□□□□ 0.9
TPM1-204ENST00000334895 CD1CP29017 333 aa20.68■□□□□ 0.9
TPM1-204ENST00000334895 CMPK1P30085 196 aa20.68■□□□□ 0.9
TPM1-204ENST00000334895 HOXD11P31277 338 aaPredicted RBP20.68■□□□□ 0.9
TPM1-204ENST00000334895 CSF2RBP32927 897 aa20.68■□□□□ 0.9
TPM1-204ENST00000334895 GFERP55789 205 aa20.68■□□□□ 0.9
TPM1-204ENST00000334895 CSNK1G2P78368 415 aa20.68■□□□□ 0.9
TPM1-204ENST00000334895 DAB2P98082 770 aa20.68■□□□□ 0.9
TPM1-204ENST00000334895 SLBPQ14493 270 aaKnown RBP eCLIP20.68■□□□□ 0.9
TPM1-204ENST00000334895 CPSF6Q16630 551 aaKnown RBP eCLIP20.68■□□□□ 0.9
TPM1-204ENST00000334895 SLC5A12Q1EHB4 618 aa20.68■□□□□ 0.9
TPM1-204ENST00000334895 GRHL2Q6ISB3 625 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms