RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 TAF8Q7Z7C8 310 aa10.78□□□□□ -0.68
APOBEC3B-201ENST00000333467 ISCA2Q86U28 154 aa10.78□□□□□ -0.68
APOBEC3B-201ENST00000333467 TRIM74Q86UV6 250 aa10.78□□□□□ -0.68
APOBEC3B-201ENST00000333467 SFTPA2Q8IWL1 248 aa10.78□□□□□ -0.68
APOBEC3B-201ENST00000333467 AQP12AQ8IXF9 295 aa10.78□□□□□ -0.68
APOBEC3B-201ENST00000333467 TMEM102Q8N9M5 508 aaPredicted RBP10.78□□□□□ -0.68
APOBEC3B-201ENST00000333467 OR6P1Q8NGX9 317 aa10.78□□□□□ -0.68
APOBEC3B-201ENST00000333467 NAT14Q8WUY8 206 aa10.78□□□□□ -0.68
APOBEC3B-201ENST00000333467 AP2M1Q96CW1 435 aa10.78□□□□□ -0.68
APOBEC3B-201ENST00000333467 ARMC1Q9NVT9 282 aa10.78□□□□□ -0.68
APOBEC3B-201ENST00000333467 GID8Q9NWU2 228 aa10.78□□□□□ -0.68
APOBEC3B-201ENST00000333467 PTTG2Q9NZH5 202 aa10.78□□□□□ -0.68
APOBEC3B-201ENST00000333467 ADA2Q9NZK5 511 aa10.78□□□□□ -0.68
APOBEC3B-201ENST00000333467 COMMD10Q9Y6G5 202 aa10.78□□□□□ -0.68
APOBEC3B-201ENST00000333467 A0A087WV48 116 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 C1orf232A0A0U1RR37 186 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 CCDC78A2IDD5 438 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 CLGNO14967 610 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 CD3EAPO15446 510 aaKnown RBP10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 NDST3O95803 873 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 CLPTM1O96005 669 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 NPPAP01160 153 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 JUNP05412 331 aaKnown RBP10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 CEACAM5P06731 702 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 FCGR1AP12314 374 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 CD1DP15813 335 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 CCR10P46092 362 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 GNPDA1P46926 289 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 NR1H2P55055 460 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 PKNOX1P55347 436 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 TXNL4AP83876 142 aaKnown RBP10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 MS4A2Q01362 244 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 PTSQ03393 145 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 SPIDRQ14159 915 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 TLR1Q15399 786 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 AP1ARQ63HQ0 302 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 OGFOD2Q6N063 350 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 AFTPHQ6ULP2 937 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 ZNF765Q7L2R6 523 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 SPATA19Q7Z5L4 167 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 PHC3Q8NDX5 983 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 FAM46DQ8NEK8 389 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 GPR156Q8NFN8 814 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 SNIP1Q8TAD8 396 aaKnown RBP10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 STAG3L4Q8TBR4 150 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 SCAMP4Q969E2 229 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 HDAC10Q969S8 669 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 ZNF597Q96LX8 424 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 LYSMD1Q96S90 227 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 NPAS2Q99743 824 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 C1QTNF3Q9BXJ4 246 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 DERL2Q9GZP9 239 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 ABCG8Q9H221 673 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 COPS7BQ9H9Q2 264 aaPredicted RBP10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 ABCD2Q9UBJ2 740 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 ENTPD2Q9Y5L3 495 aa10.77□□□□□ -0.69
APOBEC3B-201ENST00000333467 IGSF10Q6WRI0 2623 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 D6RAR5 112 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 STX16-NPEPL1H3BU86 382 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 STX16O14662 325 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 AZIN1O14977 448 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 HNRNPRO43390 633 aaKnown RBP10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 NOBOXO60393 691 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 KERAO60938 352 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 SUPT7LO94864 414 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 CLDN7O95471 211 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 SLC4A1P02730 911 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 FUCA1P04066 466 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 PYGLP06737 847 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 HSD17B1P14061 328 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 IDO1P14902 403 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 ZNF37AP17032 561 aaPredicted RBP10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 ERFP50548 548 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 TUBA4AP68366 448 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 ILF3Q12906 894 aaKnown RBP eCLIP10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 LSAMPQ13449 338 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 TBC1D25Q3MII6 688 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 C14orf28Q4W4Y0 310 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 UNC50Q53HI1 259 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 THEMIS2Q5TEJ8 643 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 KANK2Q63ZY3 851 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 ADAMTSL4Q6UY14 1074 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 GK5Q6ZS86 529 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 DHFR2Q86XF0 187 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 MIER2Q8N344 545 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 NKAPQ8N5F7 415 aaKnown RBP10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 ANKFN1Q8N957 763 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 OR4L1Q8NH43 312 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 WDR48Q8TAF3 677 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 KIAA1191Q96A73 305 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 EME1Q96AY2 570 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 SGF29Q96ES7 293 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 PPP1R36Q96LQ0 422 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 NDNQ99608 321 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 PKP2Q99959 881 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 AARSD1Q9BTE6 412 aaKnown RBP10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 DPEP2Q9H4A9 486 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 CATSPERZQ9NTU4 200 aa10.76□□□□□ -0.69
APOBEC3B-201ENST00000333467 NLE1Q9NVX2 485 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms