RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 TRBV5-4A0A0C4DH59 114 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 FKBP9O95302 570 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 KRT20P35900 424 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 MAGEA2P43356 314 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 HTRA3P83110 453 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 ABHD18Q0P651 414 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 BOP1Q14137 746 aaKnown RBP11.96□□□□□ -0.5
VPS33B-201ENST00000333371 SYT16Q17RD7 645 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 TXNDC8Q6A555 127 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 SERPINA13PQ6UXR4 307 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 TPGS1Q6ZTW0 290 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 AHSA2Q719I0 299 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 FKBP9P1Q75LS8 142 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 P2RY8Q86VZ1 359 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 MFSD4AQ8N468 514 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 ARL14EPQ8N8R7 260 aaPredicted RBP11.96□□□□□ -0.5
VPS33B-201ENST00000333371 ADAMTS19Q8TE59 1207 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 UBTD2Q8WUN7 234 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 MAL2Q969L2 176 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 PANX1Q96RD7 426 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 HMG20AQ9NP66 347 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 MAN2B2Q9Y2E5 1009 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 BTBD3Q9Y2F9 522 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 SAMHD1Q9Y3Z3 626 aaKnown RBP11.96□□□□□ -0.5
VPS33B-201ENST00000333371 YIPF1Q9Y548 306 aa11.96□□□□□ -0.5
VPS33B-201ENST00000333371 GOLGA4Q13439 2230 aaKnown RBP11.95□□□□□ -0.5
VPS33B-201ENST00000333371 TMEM221A6NGB7 291 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 CLIC1O00299 241 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 WNT9AO14904 365 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 FAM20BO75063 409 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 SOD2P04179 222 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 ITGAMP11215 1152 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 ACVR2AP27037 513 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 CTSOP43234 321 aaPredicted RBP11.95□□□□□ -0.5
VPS33B-201ENST00000333371 EIF2B2P49770 351 aaKnown RBP11.95□□□□□ -0.5
VPS33B-201ENST00000333371 CREMQ03060 361 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 MVKQ03426 396 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 DGKKQ5KSL6 1271 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 KDM4DQ6B0I6 523 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 MACC1Q6ZN28 852 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 ANKRD33Q7Z3H0 272 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 CADM3Q8N126 398 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 ATG16L2Q8NAA4 619 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 YIPF6Q96EC8 236 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 HSH2DQ96JZ2 352 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 ZNF558Q96NG5 402 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 ZNF300Q96RE9 604 aaPredicted RBP11.95□□□□□ -0.5
VPS33B-201ENST00000333371 DUSP21Q9H596 190 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 IL1RAPQ9NPH3 570 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 PAIP2BQ9ULR5 123 aaKnown RBP11.95□□□□□ -0.5
VPS33B-201ENST00000333371 B3GNT3Q9Y2A9 372 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 KCNE1BA0A087WTH5 132 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 FPGTO14772 594 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 ZNF821O75541 412 aaPredicted RBP11.95□□□□□ -0.5
VPS33B-201ENST00000333371 KCNK5O95279 499 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 VIPP01282 170 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 TNFRSF1BP20333 461 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 SPAM1P38567 509 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 HALP42357 657 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 CARTPTQ16568 116 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 UGT8Q16880 541 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 INAVAQ3KP66 663 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 TPGS2Q68CL5 300 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 LRRC66Q68CR7 880 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 CNKSR3Q6P9H4 555 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 ADCK1Q86TW2 530 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 PTOV1Q86YD1 416 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 MTERF1Q99551 399 aaKnown RBP11.95□□□□□ -0.5
VPS33B-201ENST00000333371 P2RY13Q9BPV8 354 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 HTATIP2Q9BUP3 242 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 MROQ9BYG7 248 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 RETREG1Q9H6L5 497 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 EPS8L2Q9H6S3 715 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 RMND5AQ9H871 391 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 ASIC5Q9NY37 505 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.95□□□□□ -0.5
VPS33B-201ENST00000333371 ATP11BQ9Y2G3 1177 aa11.95□□□□□ -0.5
VPS33B-201ENST00000333371 HELZP42694 1942 aaKnown RBP11.94□□□□□ -0.5
VPS33B-201ENST00000333371 KPNA4O00629 521 aaPredicted RBP11.94□□□□□ -0.5
VPS33B-201ENST00000333371 PCDHGA12O60330 932 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 CCNDBP1O95273 360 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 CA8P35219 290 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 KIR3DL1P43629 444 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 PRSS36Q5K4E3 855 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 CAPN13Q6MZZ7 669 aaPredicted RBP11.94□□□□□ -0.5
VPS33B-201ENST00000333371 NOXRED1Q6NXP6 359 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 CRTC1Q6UUV9 634 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 CYP2U1Q7Z449 544 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 TMEM150AQ86TG1 271 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 HORMAD1Q86X24 394 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 ZZZ3Q8IYH5 903 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 RNF168Q8IYW5 571 aaPredicted RBP11.94□□□□□ -0.5
VPS33B-201ENST00000333371 DYNC2LI1Q8TCX1 351 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 ZNF566Q969W8 418 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 ACOT13Q9NPJ3 140 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 TMEM184CQ9NVA4 438 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 KIF17Q9P2E2 1029 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 PCDH10Q9P2E7 1040 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 CDH23Q9H251 3354 aa11.94□□□□□ -0.5
VPS33B-201ENST00000333371 M0QX08 132 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms