RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 RGS14O43566 566 aa19.46■□□□□ 0.71
SUMO3-201ENST00000332859 RPL10P27635 214 aaKnown RBP19.46■□□□□ 0.71
SUMO3-201ENST00000332859 SLC7A1P30825 629 aa19.46■□□□□ 0.71
SUMO3-201ENST00000332859 TBPL1P62380 186 aa19.46■□□□□ 0.71
SUMO3-201ENST00000332859 IRF8Q02556 426 aa19.46■□□□□ 0.71
SUMO3-201ENST00000332859 PCDH1Q08174 1060 aa19.46■□□□□ 0.71
SUMO3-201ENST00000332859 CHIT1Q13231 466 aa19.46■□□□□ 0.71
SUMO3-201ENST00000332859 MED21Q13503 144 aa19.46■□□□□ 0.71
SUMO3-201ENST00000332859 CPSF6Q16630 551 aaKnown RBP eCLIP19.46■□□□□ 0.71
SUMO3-201ENST00000332859 TICAM1Q8IUC6 712 aa19.46■□□□□ 0.71
SUMO3-201ENST00000332859 SLC15A3Q8IY34 581 aa19.46■□□□□ 0.71
SUMO3-201ENST00000332859 TBC1D21Q8IYX1 336 aa19.46■□□□□ 0.71
SUMO3-201ENST00000332859 GOLM1Q8NBJ4 401 aa19.46■□□□□ 0.71
SUMO3-201ENST00000332859 USP7Q93009 1102 aa19.46■□□□□ 0.71
SUMO3-201ENST00000332859 SLC39A3Q9BRY0 314 aa19.46■□□□□ 0.71
SUMO3-201ENST00000332859 EFHD1Q9BUP0 239 aa19.46■□□□□ 0.71
SUMO3-201ENST00000332859 TPSD1Q9BZJ3 242 aa19.46■□□□□ 0.71
SUMO3-201ENST00000332859 CHRDQ9H2X0 955 aa19.46■□□□□ 0.71
SUMO3-201ENST00000332859 CNOT11Q9UKZ1 510 aaKnown RBP19.46■□□□□ 0.71
SUMO3-201ENST00000332859 ZNF490Q9ULM2 529 aaPredicted RBP19.46■□□□□ 0.71
SUMO3-201ENST00000332859 TDRKHQ9Y2W6 561 aaKnown RBP19.46■□□□□ 0.71
SUMO3-201ENST00000332859 PLEKHM1Q9Y4G2 1056 aa19.46■□□□□ 0.71
SUMO3-201ENST00000332859 LSM1O15116 133 aaKnown RBP19.45■□□□□ 0.7
SUMO3-201ENST00000332859 JUPP14923 745 aa19.45■□□□□ 0.7
SUMO3-201ENST00000332859 HSD17B2P37059 387 aa19.45■□□□□ 0.7
SUMO3-201ENST00000332859 RABIFP47224 123 aa19.45■□□□□ 0.7
SUMO3-201ENST00000332859 ATXN3P54252 364 aaPredicted RBP19.45■□□□□ 0.7
SUMO3-201ENST00000332859 UFM1P61960 85 aa19.45■□□□□ 0.7
SUMO3-201ENST00000332859 NR6A1Q15406 480 aa19.45■□□□□ 0.7
SUMO3-201ENST00000332859 PRR23BQ6ZRT6 265 aa19.45■□□□□ 0.7
SUMO3-201ENST00000332859 TRIM46Q7Z4K8 759 aa19.45■□□□□ 0.7
SUMO3-201ENST00000332859 LILRA2Q8N149 483 aa19.45■□□□□ 0.7
SUMO3-201ENST00000332859 SPEM1Q8N4L4 309 aa19.45■□□□□ 0.7
SUMO3-201ENST00000332859 BIRC7Q96CA5 298 aa19.45■□□□□ 0.7
SUMO3-201ENST00000332859 PDXPQ96GD0 296 aa19.45■□□□□ 0.7
SUMO3-201ENST00000332859 C12orf66Q96MD2 445 aa19.45■□□□□ 0.7
SUMO3-201ENST00000332859 OR4K3Q96R72 315 aa19.45■□□□□ 0.7
SUMO3-201ENST00000332859 PKP2Q99959 881 aa19.45■□□□□ 0.7
SUMO3-201ENST00000332859 C1orf50Q9BV19 199 aa19.45■□□□□ 0.7
SUMO3-201ENST00000332859 SGPP1Q9BX95 441 aa19.45■□□□□ 0.7
SUMO3-201ENST00000332859 ELOVL6Q9H5J4 265 aa19.45■□□□□ 0.7
SUMO3-201ENST00000332859 THEGQ9P2T0 379 aa19.45■□□□□ 0.7
SUMO3-201ENST00000332859 CFAP20Q9Y6A4 193 aaKnown RBP19.45■□□□□ 0.7
SUMO3-201ENST00000332859 KCNE2Q9Y6J6 123 aa19.45■□□□□ 0.7
SUMO3-201ENST00000332859 PRUNE2Q8WUY3 3088 aa19.45■□□□□ 0.7
SUMO3-201ENST00000332859 IGHV1OR15-9A0A0B4J2B8 117 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 STK25O00506 426 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 SLC6A2P23975 617 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 PRKG2Q13237 762 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 MAD2L1Q13257 205 aaPredicted RBP19.44■□□□□ 0.7
SUMO3-201ENST00000332859 NFYCQ13952 458 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 ARHGAP19Q14CB8 494 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 XKR6Q5GH73 641 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 IL23RQ5VWK5 629 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 ABI3BPQ7Z7G0 1075 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 ZFAND4Q86XD8 727 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 TMEM102Q8N9M5 508 aaPredicted RBP19.44■□□□□ 0.7
SUMO3-201ENST00000332859 PJA1Q8NG27 643 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 CLDN23Q96B33 292 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 MIEF2Q96C03 454 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 HBEGFQ99075 208 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 Q9H521 79 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 IL1RL2Q9HB29 575 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 CCDC177Q9NQR7 707 aaPredicted RBP19.44■□□□□ 0.7
SUMO3-201ENST00000332859 SPATA7Q9P0W8 599 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 WDR37Q9Y2I8 494 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 DYRK1BQ9Y463 629 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 PCDHA9Q9Y5H5 950 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 C15orf38-AP3S2A0A0A6YYH1 394 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 AQP12BA6NM10 295 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 ZNF839A8K0R7 811 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 E7EQ34 232 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 PRAMEF4O60810 478 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 HNF4AP41235 474 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 HSPA13P48723 471 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 TAP2Q03519 686 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 IMPG1Q17R60 797 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 SGO1Q5FBB7 561 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 TPRG1LQ5T0D9 272 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 PRAMEF9Q5VWM5 478 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 Q6ZSR6 202 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 ARPINQ7Z6K5 226 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 AQP12AQ8IXF9 295 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 LRRC56Q8IYG6 542 aaPredicted RBP19.44■□□□□ 0.7
SUMO3-201ENST00000332859 GJD3Q8N144 294 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 TEX37Q96LM6 180 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 FERD3LQ96RJ6 166 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 INSM2Q96T92 566 aaPredicted RBP19.44■□□□□ 0.7
SUMO3-201ENST00000332859 FARSBQ9NSD9 589 aaKnown RBP19.44■□□□□ 0.7
SUMO3-201ENST00000332859 CMTM6Q9NX76 183 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 RAB26Q9ULW5 256 aa19.44■□□□□ 0.7
SUMO3-201ENST00000332859 ASPDHA6ND91 283 aa19.43■□□□□ 0.7
SUMO3-201ENST00000332859 PDZK1P1A8MUH7 402 aa19.43■□□□□ 0.7
SUMO3-201ENST00000332859 PI15O43692 258 aa19.43■□□□□ 0.7
SUMO3-201ENST00000332859 LYNP07948 512 aa19.43■□□□□ 0.7
SUMO3-201ENST00000332859 ERGP11308 486 aa19.43■□□□□ 0.7
SUMO3-201ENST00000332859 PIM1P11309 404 aaPredicted RBP19.43■□□□□ 0.7
SUMO3-201ENST00000332859 TSTA3Q13630 321 aaPredicted RBP19.43■□□□□ 0.7
SUMO3-201ENST00000332859 TLR1Q15399 786 aa19.43■□□□□ 0.7
SUMO3-201ENST00000332859 UAP1L1Q3KQV9 507 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms