RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 ZNF641Q96N77 438 aaPredicted RBP14.91□□□□□ -0.02
BRCC3-201ENST00000330045 HHIPQ96QV1 700 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 PANX1Q96RD7 426 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 LYSMD1Q96S90 227 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 ERVW-1Q9UQF0 538 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 PCDHGA10Q9Y5H3 936 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 GMPPBQ9Y5P6 360 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 EIF3FO00303 357 aaPredicted RBP14.91□□□□□ -0.02
BRCC3-201ENST00000330045 ZNF821O75541 412 aaPredicted RBP14.91□□□□□ -0.02
BRCC3-201ENST00000330045 DIRAS1O95057 198 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 C1QCP02747 245 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 FABP3P05413 133 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 C8GP07360 202 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 OR56A5P0C7T3 313 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 ENGP17813 658 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 CDH3P22223 829 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 ACVR2AP27037 513 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 AOAHP28039 575 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 CD6P30203 668 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 MAP2K4P45985 399 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 TRPC1P48995 793 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 HNRNPFP52597 415 aaKnown RBP14.91□□□□□ -0.02
BRCC3-201ENST00000330045 CXCR4P61073 352 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 CBX3Q13185 183 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 DUOXA1Q1HG43 343 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 DGKKQ5KSL6 1271 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 LRRC66Q68CR7 880 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 NOXRED1Q6NXP6 359 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 NEK5Q6P3R8 708 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 CNKSR3Q6P9H4 555 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 TPRG1Q6ZUI0 275 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 BTLAQ7Z6A9 289 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 VMP1Q96GC9 406 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 WDR12Q9GZL7 423 aaKnown RBP14.91□□□□□ -0.02
BRCC3-201ENST00000330045 RPS6KA6Q9UK32 745 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 CPQQ9Y646 472 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 C5orf42Q9H799 3197 aa14.91□□□□□ -0.02
BRCC3-201ENST00000330045 PABPN1LA6NDY0 278 aaKnown RBP14.9□□□□□ -0.02
BRCC3-201ENST00000330045 NPIPB8E9PQR5 432 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 hCG_2039718K7EN88 272 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 M0R3G1 203 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 KPNA4O00629 521 aaPredicted RBP14.9□□□□□ -0.02
BRCC3-201ENST00000330045 TOR1BO14657 336 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 FPGTO14772 594 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 FPR1P21462 350 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 SLC6A12P48065 614 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 HNMTP50135 292 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 MTAPQ13126 283 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 CYP2A13Q16696 494 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 VMACQ2NL98 169 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 TRIM16LQ309B1 348 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 FRG2Q64ET8 278 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 TPGS2Q68CL5 300 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 LAIR1Q6GTX8 287 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 OTOP2Q7RTS6 562 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 RNF168Q8IYW5 571 aaPredicted RBP14.9□□□□□ -0.02
BRCC3-201ENST00000330045 PGBD3Q8N328 593 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 TTC29Q8NA56 475 aaPredicted RBP14.9□□□□□ -0.02
BRCC3-201ENST00000330045 CSGALNACT1Q8TDX6 532 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 ASB11Q8WXH4 323 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 FRG2BQ96QU4 278 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 APOL4Q9BPW4 351 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 REXO4Q9GZR2 422 aaKnown RBP14.9□□□□□ -0.02
BRCC3-201ENST00000330045 ARMC7Q9H6L4 198 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 NECTIN3Q9NQS3 549 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 PDP1Q9P0J1 537 aaPredicted RBP14.9□□□□□ -0.02
BRCC3-201ENST00000330045 SLC22A14Q9Y267 594 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 CHD9Q3L8U1 2897 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 KCNK5O95279 499 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 ACPPP15309 386 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 PRPS1L1P21108 318 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 KDELR2P33947 212 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 VLDLRP98155 873 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 GBX1Q14549 363 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 ADPRMQ3LIE5 342 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 TXNDC8Q6A555 127 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 CCDC81Q6ZN84 652 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 LINC00299Q6ZSB3 139 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 ZNF621Q6ZSS3 439 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 CYP2U1Q7Z449 544 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 GALNT10Q86SR1 603 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 HORMAD1Q86X24 394 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 ZZZ3Q8IYH5 903 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 ZNF540Q8NDQ6 660 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 OR2AP1Q8NGE2 309 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 GLMNQ92990 594 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 SCRN2Q96FV2 425 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 NEURL2Q9BR09 285 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 EBPLQ9BY08 206 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 AKIP1Q9NQ31 210 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 ABCB8Q9NUT2 735 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 CLEC4EQ9ULY5 219 aa14.9□□□□□ -0.02
BRCC3-201ENST00000330045 PRAMEF4O60810 478 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 JRKO75564 520 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 EPN2O95208 641 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 GPX2P18283 190 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 HALP42357 657 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 GJA8P48165 433 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 LSM3P62310 102 aaKnown RBP14.89□□□□□ -0.03
BRCC3-201ENST00000330045 PTSQ03393 145 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms