RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 EGFL8Q99944 293 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 EBF4Q9BQW3 602 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 NUDT22Q9BRQ3 303 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 CD244Q9BZW8 370 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 NMUR2Q9GZQ4 415 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 MID1IP1Q9NPA3 183 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 EVA1BQ9NVM1 165 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 AHCTF1Q8WYP5 2266 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 MGAT4DA6NG13 374 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 OR52A4PA6NMU1 304 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 RHPN2P1A8MT19 583 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 K7EPI3 171 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 HGSO14964 777 aaPredicted RBP15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 PSIP1O75475 530 aaKnown RBP15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 CRCPO75575 148 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 STK16O75716 305 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 SIX3O95343 332 aaPredicted RBP15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 F3P13726 295 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 PNLIPP16233 465 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 PBLDP30039 288 aaPredicted RBP15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 SH3BP2P78314 561 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 BOP1Q14137 746 aaKnown RBP15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 NR1D2Q14995 579 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 KANK2Q63ZY3 851 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 RBM44Q6ZP01 1051 aaKnown RBP15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 GPRIN3Q6ZVF9 776 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 LRRC70Q7Z2Q7 622 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 OR2L2Q8NH16 312 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 KLHL29Q96CT2 875 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 PRR11Q96HE9 360 aaPredicted RBP15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 CCDC138Q96M89 665 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 RAB3IPQ96QF0 476 aaPredicted RBP15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 GFM1Q96RP9 751 aaKnown RBP15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 TIMM29Q9BSF4 260 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 CCDC106Q9BWC9 280 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 NUF2Q9BZD4 464 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 SEMA6CQ9H3T2 930 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 WWOXQ9NZC7 414 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 TMEM9Q9P0T7 183 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 OPTCQ9UBM4 332 aa15.91■□□□□ 0.14
PDLIM1-201ENST00000329399 MGAQ8IWI9 3026 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 NCF1BA6NI72 391 aaPredicted RBP15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 NCF1CA8MVU1 366 aaPredicted RBP15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 D6RAR5 112 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 UBFD1O14562 309 aaKnown RBP15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 ESRRAP11474 423 aaPredicted RBP15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 NCF1P14598 390 aaPredicted RBP15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 EZRP15311 586 aaKnown RBP15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 PTPN4P29074 926 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 FASLGP48023 281 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 UBE2IP63279 158 aaKnown RBP15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 GTF2H2Q13888 395 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 SPIDRQ14159 915 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 ZRSR2Q15696 482 aaKnown RBP15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 ST3GAL2Q16842 350 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 ZNF658BQ4V348 819 aaPredicted RBP15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 SLC9B1Q4ZJI4 515 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 GTF2H2CQ6P1K8 395 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 AMZ2Q86W34 360 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 KLHDC8AQ8IYD2 350 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 PHC3Q8NDX5 983 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 OR6C4Q8NGE1 309 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 TRPC4APQ8TEL6 797 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 SKA2Q8WVK7 121 aaPredicted RBP15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 FBXL8Q96CD0 374 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 DEPDC7Q96QD5 511 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 NTMT1Q9BV86 223 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 LRMDAQ9H2I8 198 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 ARL15Q9NXU5 204 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 CPNE7Q9UBL6 633 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 FAM8A1Q9UBU6 413 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 TAGLN3Q9UI15 199 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 ZMIZ1Q9ULJ6 1067 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 PSMD13Q9UNM6 376 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 PDE10AQ9Y233 779 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 ANGPTL3Q9Y5C1 460 aa15.9■□□□□ 0.14
PDLIM1-201ENST00000329399 IGHV1OR21-1A0A087WYE8 117 aa15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 SDHDO14521 159 aa15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 EPB42P16452 691 aa15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 CSF2RBP32927 897 aa15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 ATP4BP51164 291 aa15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 CDH13P55290 713 aa15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 NCALDP61601 193 aa15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 HHEXQ03014 270 aa15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 BTKQ06187 659 aa15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 ZNF33BQ06732 778 aa15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 ZFP36L1Q07352 338 aaKnown RBP15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 RTP5Q14D33 572 aa15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 LSM12Q3MHD2 195 aaKnown RBP15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 UGT3A2Q3SY77 523 aa15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 ABRAXAS1Q6UWZ7 409 aa15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 ASRGL1Q7L266 308 aa15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 SPDYE1Q8NFV5 336 aaPredicted RBP15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 ZCCHC14Q8WYQ9 949 aaKnown RBP15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 PTCD3Q96EY7 689 aaKnown RBP15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 TBC1D10AQ9BXI6 508 aa15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 C1orf21Q9H246 121 aa15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 TMEM45AQ9NWC5 275 aa15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 UTP6Q9NYH9 597 aaKnown RBP15.89■□□□□ 0.13
PDLIM1-201ENST00000329399 ADAMTS6Q9UKP5 1117 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms