RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 CCNDBP1O95273 360 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 NUDT7P0C024 238 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 AMD1P17707 334 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 LAG3P18627 525 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 HLA-FP30511 346 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 DAPP51397 102 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 ACSM2AQ08AH3 577 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 ACSM2BQ68CK6 577 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 C22orf39Q6P5X5 142 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 Q6ZVL8 140 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 SLCO6A1Q86UG4 719 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 LMNTD1Q8N9Z9 388 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 ASB11Q8WXH4 323 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 MAL2Q969L2 176 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 IL21Q9HBE4 155 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 SELENONQ9NZV5 590 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 SH3BP4Q9P0V3 963 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 AP3M1Q9Y2T2 418 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 CASP8AP2Q9UKL3 1982 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 MAGEB17A8MXT2 336 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 FAM20BO75063 409 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 LAMP1P11279 417 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 ATP1B2P14415 290 aaPredicted RBP13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 VBP1P61758 197 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 TOP3AQ13472 1001 aaPredicted RBP13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 SMU1Q2TAY7 513 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 LRIF1Q5T3J3 769 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 CNKSR3Q6P9H4 555 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 DCDC5Q6ZRR9 648 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 CRIPAKQ8N1N5 446 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 CBARPQ8N350 705 aaPredicted RBP13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 TTC29Q8NA56 475 aaPredicted RBP13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 AMBNQ9NP70 447 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 SCN3BQ9NY72 215 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 PNMA8BQ9ULN7 279 aaPredicted RBP13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 TRAV19A0A0A6YYK7 116 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 TTC36A6NLP5 189 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 NRG2O14511 850 aaPredicted RBP13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 TEX28O15482 410 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 LATS1O95835 1130 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 FABP3P05413 133 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 C8GP07360 202 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 C1SP09871 688 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 CBSLP0DN79 551 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 CBSP35520 551 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 PREPP48147 710 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 GZMMP51124 257 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 CBX2Q14781 532 aaPredicted RBP13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 TRIM60Q495X7 471 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 METTL3Q86U44 580 aaKnown RBP13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 MUL1Q969V5 352 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 HSH2DQ96JZ2 352 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 CORO1BQ9BR76 489 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 MTG2Q9H4K7 406 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 MAGIXQ9H6Y5 334 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 TMPRSS11EQ9UL52 423 aa13.62□□□□□ -0.23
ATP2C1-201ENST00000328560 MYOFQ9NZM1 2061 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 TMEM202A6NGA9 273 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 NEDD8-MDP1E9PL57 170 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 GBAP04062 536 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 INHBBP09529 407 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 PTPN6P29350 595 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 KDELR2P33947 212 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 UGT8Q16880 541 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 DUOXA1Q1HG43 343 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 VMACQ2NL98 169 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 B3GNT8Q7Z7M8 397 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 IGFN1Q86VF2 1251 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 CHCHD4Q8N4Q1 142 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 LILRA3Q8N6C8 439 aaPredicted RBP13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 GPN2Q9H9Y4 310 aaPredicted RBP13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 KRT84Q9NSB2 600 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 BTBD3Q9Y2F9 522 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 GOLGA4Q13439 2230 aaKnown RBP13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 GNG14A0A1W2PPG7 69 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 XPAP23025 273 aaPredicted RBP13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 SPINT3P49223 89 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 FPGSQ05932 587 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 RGS21Q2M5E4 152 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 HKDC1Q2TB90 917 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 RFX4Q33E94 735 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 CCSMST1Q4G0I0 132 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 SYTL3Q4VX76 610 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 SHQ1Q6PI26 577 aaKnown RBP13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 SLC16A12Q6ZSM3 486 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 TMEM25Q86YD3 366 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 SORCS1Q8WY21 1168 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 REEP1Q9H902 201 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 CHCHD3Q9NX63 227 aaKnown RBP13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 ASIC5Q9NY37 505 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 ERVK-11Q9UQG0 969 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 MAN2B2Q9Y2E5 1009 aa13.61□□□□□ -0.23
ATP2C1-201ENST00000328560 E7EQ34 232 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 NADKO95544 446 aaPredicted RBP13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 OPN1SWP03999 348 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 FUCA1P04066 466 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 TNFRSF1BP20333 461 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 PRPS1L1P21108 318 aa13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 CLK3P49761 638 aaKnown RBP13.6□□□□□ -0.23
ATP2C1-201ENST00000328560 TRIM16LQ309B1 348 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms