RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 CUL1Q13616 776 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 ARHGAP19Q14CB8 494 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 NAA25Q14CX7 972 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 NR6A1Q15406 480 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 HIF1AQ16665 826 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 MUM1Q2TAK8 710 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 PRTGQ2VWP7 1150 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 TUBB8Q3ZCM7 444 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 C4orf17Q53FE4 359 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 CRB2Q5IJ48 1285 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 AGAP7PQ5VUJ5 663 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 HIST2H2BCQ6DN03 193 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 ZNF549Q6P9A3 640 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 Q6ZS92 163 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 CUZD1Q86UP6 607 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 PPFIBP2Q8ND30 876 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 OR11G2Q8NGC1 345 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 STT3BQ8TCJ2 826 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 SSC4DQ8WTU2 575 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 MIEF2Q96C03 454 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 C10orf90Q96M02 699 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 SERPINB12Q96P63 405 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 AGAP4Q96P64 663 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 CRB3Q9BUF7 120 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 XAB2Q9HCS7 855 aaKnown RBP13.47□□□□□ -0.25
RPAIN-201ENST00000327154 ABCF3Q9NUQ8 709 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 ZNF282Q9UDV7 671 aaPredicted RBP13.47□□□□□ -0.25
RPAIN-201ENST00000327154 TAC3Q9UHF0 121 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 NEU2Q9Y3R4 380 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 CSAG2Q9Y5P2 127 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 COPG1Q9Y678 874 aaKnown RBP13.47□□□□□ -0.25
RPAIN-201ENST00000327154 MAD1L1Q9Y6D9 718 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 CCDC88CQ9P219 2028 aa13.47□□□□□ -0.25
RPAIN-201ENST00000327154 IGKV1-8A0A0C4DH67 115 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 SLC16A8O95907 504 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 SYF2O95926 243 aaKnown RBP13.46□□□□□ -0.25
RPAIN-201ENST00000327154 RNF224P0DH78 156 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 PRDX1Q06830 199 aaKnown RBP13.46□□□□□ -0.25
RPAIN-201ENST00000327154 Q0VFX4 171 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 TTLL9Q3SXZ7 439 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 VWA2Q5GFL6 755 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 IRAK1BP1Q5VVH5 260 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 ICE2Q659A1 982 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 CCDC137Q6PK04 289 aaKnown RBP13.46□□□□□ -0.25
RPAIN-201ENST00000327154 CYHR1Q6ZMK1 362 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 NEK10Q6ZWH5 1172 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 LAPTM4BQ86VI4 370 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 PAQR7Q86WK9 346 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 AGGF1Q8N302 714 aaeCLIP13.46□□□□□ -0.25
RPAIN-201ENST00000327154 GIMAP7Q8NHV1 300 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 DNAJB14Q8TBM8 379 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 ACTRT1Q8TDG2 376 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 ZNF480Q8WV37 535 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 ASB11Q8WXH4 323 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 THOC3Q96J01 351 aaKnown RBP13.46□□□□□ -0.25
RPAIN-201ENST00000327154 CABS1Q96KC9 395 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 CAPZA3Q96KX2 299 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 YIPF2Q9BWQ6 316 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 LHPPQ9H008 270 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 CCDC68Q9H2F9 335 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 SYNPO2LQ9H987 977 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 C20orf96Q9NUD7 363 aaPredicted RBP13.46□□□□□ -0.25
RPAIN-201ENST00000327154 CUEDC1Q9NWM3 386 aaPredicted RBP13.46□□□□□ -0.25
RPAIN-201ENST00000327154 KLHL42Q9P2K6 505 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 PLEKHB1Q9UF11 243 aaPredicted RBP13.46□□□□□ -0.25
RPAIN-201ENST00000327154 C3orf18Q9UK00 162 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 RUVBL1Q9Y265 456 aaKnown RBP13.46□□□□□ -0.25
RPAIN-201ENST00000327154 MED16Q9Y2X0 877 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 DHRS7Q9Y394 339 aa13.46□□□□□ -0.25
RPAIN-201ENST00000327154 PRRC2CQ9Y520 2896 aaKnown RBP13.46□□□□□ -0.26
RPAIN-201ENST00000327154 GOLGA6L10A0A0M3HER8 536 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 ZNF839A8K0R7 811 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 E7ENX8 843 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 GFYI3L273 518 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 SMAPO00193 183 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 CES2O00748 559 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 FFAR3O14843 346 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 GPR42O15529 346 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 VPS26AO75436 327 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 HAUS5O94927 633 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 FBLP22087 321 aaKnown RBP13.45□□□□□ -0.26
RPAIN-201ENST00000327154 SLC1A2P43004 574 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 CARSP49589 748 aaKnown RBP13.45□□□□□ -0.26
RPAIN-201ENST00000327154 EMP3P54852 163 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 TAP2Q03519 686 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 CYP1B1Q16678 543 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 LONRF1Q17RB8 773 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 HKDC1Q2TB90 917 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 ATG9BQ674R7 924 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 ZNF425Q6IV72 752 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 CSNK1A1LQ8N752 337 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 KCNJ9Q92806 393 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 C8orf44Q96CB5 159 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 VPS50Q96JG6 964 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 SIGLEC10Q96LC7 697 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 OR2A5Q96R48 311 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 GPR21Q99679 349 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 WDR77Q9BQA1 342 aaPredicted RBP13.45□□□□□ -0.26
RPAIN-201ENST00000327154 ZNF160Q9HCG1 818 aa13.45□□□□□ -0.26
RPAIN-201ENST00000327154 UTP6Q9NYH9 597 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms