RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 GAS2L1Q99501 681 aaPredicted RBP20.52■□□□□ 0.88
RNF40-201ENST00000324685 CTPS2Q9NRF8 586 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 CDC14AQ9UNH5 594 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 ASB3Q9Y575 518 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 HSD11B1P28845 292 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 AP2S1P53680 142 aaPredicted RBP20.52■□□□□ 0.88
RNF40-201ENST00000324685 NADK2Q4G0N4 442 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 CLEC12AQ5QGZ9 265 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 GDPD4Q6W3E5 623 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 GRHL3Q8TE85 626 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 CLEC4DQ8WXI8 215 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 DHRS1Q96LJ7 313 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 NR2E1Q9Y466 385 aa20.52■□□□□ 0.88
RNF40-201ENST00000324685 SLC31A1O15431 190 aa20.52■□□□□ 0.87
RNF40-201ENST00000324685 WDR4P57081 412 aaKnown RBP20.52■□□□□ 0.87
RNF40-201ENST00000324685 GXYLT1Q4G148 440 aa20.52■□□□□ 0.87
RNF40-201ENST00000324685 FRG2Q64ET8 278 aa20.52■□□□□ 0.87
RNF40-201ENST00000324685 ASB18Q6ZVZ8 466 aa20.52■□□□□ 0.87
RNF40-201ENST00000324685 CANT1Q8WVQ1 401 aa20.52■□□□□ 0.87
RNF40-201ENST00000324685 SLC25A36Q96CQ1 311 aa20.52■□□□□ 0.87
RNF40-201ENST00000324685 FRG2BQ96QU4 278 aa20.52■□□□□ 0.87
RNF40-201ENST00000324685 NDC1Q9BTX1 674 aa20.52■□□□□ 0.87
RNF40-201ENST00000324685 WDR26Q9H7D7 661 aa20.52■□□□□ 0.87
RNF40-201ENST00000324685 LOC100130705A0A1B0GUX0 176 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 TRBC2A0A5B9 178 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 WASHC1A8K0Z3 465 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 WASH3PC4AMC7 463 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 KLF11O14901 512 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 OR7A10O76100 309 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 RAB36O95755 333 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 TCEA1P23193 301 aaKnown RBP20.51■□□□□ 0.87
RNF40-201ENST00000324685 WASH2PQ6VEQ5 465 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 OR2L8Q8NGY9 312 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 DGAT2Q96PD7 388 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 NUP50Q9UKX7 468 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 MROH1Q8NDA8 1641 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 UGT1A6P19224 532 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 UGT1A1P22309 533 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 UGT1A4P22310 534 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 ENPP2Q13822 863 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 METTL8Q9H825 291 aaKnown RBP20.51■□□□□ 0.87
RNF40-201ENST00000324685 ARPC4P59998 168 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 SIRPB2Q5JXA9 342 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 PAQR7Q86WK9 346 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 CEP97Q8IW35 865 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 CHERPQ8IWX8 916 aaKnown RBP20.51■□□□□ 0.87
RNF40-201ENST00000324685 OR6C70A6NIJ9 312 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 NUAK1O60285 661 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 NIPSNAP2O75323 286 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 KDM4BO94953 1096 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 FECHP22830 423 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 SH3PXD2AQ5TCZ1 1133 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 SLAIN1Q8ND83 568 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 NTPCRQ9BSD7 190 aaKnown RBP20.51■□□□□ 0.87
RNF40-201ENST00000324685 TOR3AQ9H497 397 aa20.51■□□□□ 0.87
RNF40-201ENST00000324685 NR2C1P13056 603 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 PVALBP20472 110 aaPredicted RBP20.5■□□□□ 0.87
RNF40-201ENST00000324685 TMEM198Q66K66 360 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 PRSS55Q6UWB4 352 aaPredicted RBP20.5■□□□□ 0.87
RNF40-201ENST00000324685 CLEC20AQ6ZU45 233 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 MCCC2Q9HCC0 563 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 PCDHGB6Q9Y5F9 930 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 C8AP07357 584 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 MAGEA12P43365 314 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 DEFA5Q01523 94 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 TSTQ16762 297 aaKnown RBP20.5■□□□□ 0.87
RNF40-201ENST00000324685 OR4F3Q6IEY1 312 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 ZNF227Q86WZ6 799 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 SNIP1Q8TAD8 396 aaKnown RBP20.5■□□□□ 0.87
RNF40-201ENST00000324685 PYURFQ96I23 114 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 COL20A1Q9P218 1284 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 ZBTB48P10074 688 aaPredicted RBP20.5■□□□□ 0.87
RNF40-201ENST00000324685 XRCC1P18887 633 aaPredicted RBP20.5■□□□□ 0.87
RNF40-201ENST00000324685 GADD45AP24522 165 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 S100A2P29034 98 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 MAT2AP31153 395 aaKnown RBP20.5■□□□□ 0.87
RNF40-201ENST00000324685 YIPF7Q8N8F6 280 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 KREMEN2Q8NCW0 462 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 THAP6Q8TBB0 222 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 PNO1Q9NRX1 252 aaKnown RBP20.5■□□□□ 0.87
RNF40-201ENST00000324685 HPF1Q9NWY4 346 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 LRRC42Q9Y546 428 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 CAPN14A8MX76 684 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 HLA-DPB1P04440 258 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 OR12D2P58182 307 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 HMGCS1Q01581 520 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 KCNJ11Q14654 390 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 CAMKVQ8NCB2 501 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 OR51F1A6NGY5 319 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 TGFB1P01137 390 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 BCHEP06276 602 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 KCTD13Q8WZ19 329 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 ACTR3BQ9P1U1 418 aa20.5■□□□□ 0.87
RNF40-201ENST00000324685 A0A0G2JPF8 293 aa20.49■□□□□ 0.87
RNF40-201ENST00000324685 HNRNPCL3B7ZW38 293 aa20.49■□□□□ 0.87
RNF40-201ENST00000324685 HNRNPCL4P0DMR1 293 aa20.49■□□□□ 0.87
RNF40-201ENST00000324685 FPR1P21462 350 aa20.49■□□□□ 0.87
RNF40-201ENST00000324685 GPR68Q15743 365 aa20.49■□□□□ 0.87
RNF40-201ENST00000324685 ZNF800Q2TB10 664 aaPredicted RBP eCLIP20.49■□□□□ 0.872e-8■■□□□ 13.3
RNF40-201ENST00000324685 SMPDL3BQ92485 455 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms