RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 CCL4L1Q8NHW4 92 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 MAPK15Q8TD08 544 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 LMX1AQ8TE12 382 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 SLC5A11Q8WWX8 675 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 LCN9Q8WX39 176 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 WDR34Q96EX3 536 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 TCEAL2Q9H3H9 227 aaPredicted RBP17.41■□□□□ 0.38
SYNE4-201ENST00000324444 ELOVL6Q9H5J4 265 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 GAREM1Q9H706 876 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 TDRD6O60522 2096 aaKnown RBP17.41■□□□□ 0.38
SYNE4-201ENST00000324444 FRYQ5TBA9 3013 aa17.41■□□□□ 0.38
SYNE4-201ENST00000324444 SERTM1A2A2V5 107 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 LMO7DNF2Z398 122 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 SCAMP1O15126 338 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 SLC22A2O15244 555 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 RGS14O43566 566 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 SH3BP5O60239 455 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 SKAP2O75563 359 aaPredicted RBP17.4■□□□□ 0.38
SYNE4-201ENST00000324444 WFS1O76024 890 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 FKBP9O95302 570 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 C1GALT1C1LP0DN25 315 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 SLC19A1P41440 591 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 CTSKP43235 329 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 RXRGP48443 463 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 PHEXP78562 749 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 IFT88Q13099 833 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 TSTA3Q13630 321 aaPredicted RBP17.4■□□□□ 0.38
SYNE4-201ENST00000324444 E2F2Q14209 437 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 ZXDCQ2QGD7 858 aaPredicted RBP17.4■□□□□ 0.38
SYNE4-201ENST00000324444 SMU1Q2TAY7 513 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 HLA-BQ31612 363 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 ZNF542PQ5EBM4 170 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 ATG9BQ674R7 924 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 NXNQ6DKJ4 435 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 GRHL2Q6ISB3 625 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 C6orf89Q6UWU4 347 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 CCDC121Q6ZUS5 278 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 MAVSQ7Z434 540 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 YTHDF3Q7Z739 585 aaKnown RBP17.4■□□□□ 0.38
SYNE4-201ENST00000324444 AMIGO1Q86WK6 493 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 KRT78Q8N1N4 520 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 SFRP1Q8N474 314 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 TBC1D19Q8N5T2 526 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 ZDHHC1Q8WTX9 485 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 MENTQ9BUN1 341 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.4■□□□□ 0.38
SYNE4-201ENST00000324444 CAAP1Q9H8G2 361 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 PELI2Q9HAT8 420 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 SCHIP1Q9P0W5 487 aaPredicted RBP17.4■□□□□ 0.38
SYNE4-201ENST00000324444 ZNF624Q9P2J8 865 aaPredicted RBP17.4■□□□□ 0.38
SYNE4-201ENST00000324444 CPNE7Q9UBL6 633 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 ADGRE2Q9UHX3 823 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 ZFP69BQ9UJL9 534 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 ZNF225Q9UK10 706 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 ENTPD2Q9Y5L3 495 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 ARHGEF17Q96PE2 2063 aaPredicted RBP17.4■□□□□ 0.38
SYNE4-201ENST00000324444 CABIN1Q9Y6J0 2220 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 TMEM233B4DJY2 109 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 H0YIV9 168 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 SDHDO14521 159 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 ATP5HO75947 161 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 ZNF883P0CG24 379 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 HSD3B1P14060 373 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 EPORP19235 508 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 SPINK2P20155 84 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 HSD3B2P26439 372 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 SERPINB3P29508 390 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 PRDX3P30048 256 aaKnown RBP17.4■□□□□ 0.38
SYNE4-201ENST00000324444 SERPINB1P30740 379 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 MAD2L1Q13257 205 aaPredicted RBP17.4■□□□□ 0.38
SYNE4-201ENST00000324444 KIF19Q2TAC6 998 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 SLC9B1Q4ZJI4 515 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 FAM91A1Q658Y4 838 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 DUS1LQ6P1R4 473 aaKnown RBP17.4■□□□□ 0.38
SYNE4-201ENST00000324444 KLHL35Q6PF15 583 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 SPATA19Q7Z5L4 167 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 MTDHQ86UE4 582 aaKnown RBP17.4■□□□□ 0.38
SYNE4-201ENST00000324444 NAXDQ8IW45 347 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 PPFIBP2Q8ND30 876 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 PPP3R2Q96LZ3 170 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 CDK15Q96Q40 435 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 EBF4Q9BQW3 602 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 SRMSQ9H3Y6 488 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 UCK1Q9HA47 277 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 SLC40A1Q9NP59 571 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 NMRK1Q9NWW6 199 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 RNF11Q9Y3C5 154 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 TIMM22Q9Y584 194 aa17.4■□□□□ 0.38
SYNE4-201ENST00000324444 PIP5K1BO14986 540 aa17.39■□□□□ 0.37
SYNE4-201ENST00000324444 LBPP18428 481 aa17.39■□□□□ 0.37
SYNE4-201ENST00000324444 EPHA3P29320 983 aa17.39■□□□□ 0.37
SYNE4-201ENST00000324444 FOXA1P55317 472 aa17.39■□□□□ 0.37
SYNE4-201ENST00000324444 UBE2IP63279 158 aaKnown RBP17.39■□□□□ 0.37
SYNE4-201ENST00000324444 BIRC2Q13490 618 aa17.39■□□□□ 0.37
SYNE4-201ENST00000324444 C1orf61Q13536 156 aa17.39■□□□□ 0.37
SYNE4-201ENST00000324444 DOC2AQ14183 400 aa17.39■□□□□ 0.37
SYNE4-201ENST00000324444 KIR2DS3Q14952 304 aa17.39■□□□□ 0.37
SYNE4-201ENST00000324444 PLCL1Q15111 1095 aa17.39■□□□□ 0.37
SYNE4-201ENST00000324444 CPSF6Q16630 551 aaKnown RBP eCLIP17.39■□□□□ 0.37
SYNE4-201ENST00000324444 LSM12Q3MHD2 195 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms