RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 GBX1Q14549 363 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 NAA25Q14CX7 972 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 INAQ16352 499 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 MUM1Q2TAK8 710 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 PCID2Q5JVF3 399 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 PTRHD1Q6GMV3 140 aaKnown RBP13.55□□□□□ -0.24
RPP40-201ENST00000319533 NDUFAF7Q7L592 441 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 PRUNE1Q86TP1 453 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 LAPTM4BQ86VI4 370 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 RAB42Q8N4Z0 105 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 PPHLN1Q8NEY8 458 aaKnown RBP13.55□□□□□ -0.24
RPP40-201ENST00000319533 OR1N1Q8NGS0 311 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 HAS2Q92819 552 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 MARVELD3Q96A59 401 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 MVB12AQ96EY5 273 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 MIPEPQ99797 713 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 CHRAC1Q9NRG0 131 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 ZC3H7BQ9UGR2 993 aaKnown RBP13.55□□□□□ -0.24
RPP40-201ENST00000319533 GNPTGQ9UJJ9 305 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 C3orf18Q9UK00 162 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 TTC7AQ9ULT0 858 aaPredicted RBP13.55□□□□□ -0.24
RPP40-201ENST00000319533 A0A0J9YVX5 310 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 NRP2O60462 931 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 PHF2O75151 1096 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 JRKO75564 520 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 MATN4O95460 622 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 SERPINA7P05543 415 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 ZSCAN5DPP0CG00 497 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 PRR35P0CG20 571 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 PRF1P14222 555 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 ATP5DP30049 168 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 RPL22P35268 128 aaKnown RBP13.54□□□□□ -0.24
RPP40-201ENST00000319533 TNFSF10P50591 281 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 BASP1P80723 227 aaKnown RBP13.54□□□□□ -0.24
RPP40-201ENST00000319533 VWA2Q5GFL6 755 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 SP5Q6BEB4 398 aaPredicted RBP13.54□□□□□ -0.24
RPP40-201ENST00000319533 OTOAQ7RTW8 1153 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 SLC35F6Q8N357 371 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 ARHGEF39Q8N4T4 335 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 GSDMBQ8TAX9 411 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 MAGEC3Q8TD91 643 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 C8orf44Q96CB5 159 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 BIRC8Q96P09 236 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 TAAR6Q96RI8 345 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 ZFYVE21Q9BQ24 234 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 TGIF2Q9GZN2 237 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 EIF2B3Q9NR50 452 aaKnown RBP13.54□□□□□ -0.24
RPP40-201ENST00000319533 CDC14AQ9UNH5 594 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 OTOGQ6ZRI0 2925 aa13.54□□□□□ -0.24
RPP40-201ENST00000319533 LOC102723996A0A087X1L8 192 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 IGHV1-45A0A0A0MS14 117 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 NSG1A0A0A6YYJ2 146 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 TRAV17A0A0B4J275 112 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 KRT87PA6NCN2 255 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 AP3B1O00203 1094 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 PGRMC1O00264 195 aaKnown RBP13.53□□□□□ -0.24
RPP40-201ENST00000319533 ZNF500O60304 480 aaPredicted RBP13.53□□□□□ -0.24
RPP40-201ENST00000319533 BMP10O95393 424 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 FBLP22087 321 aaKnown RBP13.53□□□□□ -0.24
RPP40-201ENST00000319533 SLC26A3P40879 764 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 KCNJ1P48048 391 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 EMP2P54851 167 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 YBX1P67809 324 aaKnown RBP13.53□□□□□ -0.24
RPP40-201ENST00000319533 ARG2P78540 354 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 RELAQ04206 551 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 DSG2Q14126 1118 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 FASTKQ14296 549 aaKnown RBP13.53□□□□□ -0.24
RPP40-201ENST00000319533 CTSL3PQ5NE16 218 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 RIPOR1Q6ZS17 1223 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 FJX1Q86VR8 437 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 SRRM1Q8IYB3 904 aaKnown RBP13.53□□□□□ -0.24
RPP40-201ENST00000319533 RASGEF1CQ8N431 466 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 PRELID2Q8N945 189 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 BRIX1Q8TDN6 353 aaKnown RBP13.53□□□□□ -0.24
RPP40-201ENST00000319533 NR4A3Q92570 626 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 FOPNLQ96NB1 174 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 DPH7Q9BTV6 452 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 RNF32Q9H0A6 362 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 C14orf105Q9NVL8 296 aa13.53□□□□□ -0.24
RPP40-201ENST00000319533 RUVBL2Q9Y230 463 aaKnown RBP13.53□□□□□ -0.24
RPP40-201ENST00000319533 MRPS2Q9Y399 296 aaKnown RBP13.53□□□□□ -0.24
RPP40-201ENST00000319533 IGKV1-8A0A0C4DH67 115 aa13.52□□□□□ -0.25
RPP40-201ENST00000319533 GOLGA6L10A0A0M3HER8 536 aa13.52□□□□□ -0.25
RPP40-201ENST00000319533 DYTNA2CJ06 578 aa13.52□□□□□ -0.25
RPP40-201ENST00000319533 IDSB3KWA1 339 aa13.52□□□□□ -0.25
RPP40-201ENST00000319533 H0YGG7 62 aa13.52□□□□□ -0.25
RPP40-201ENST00000319533 PRPF4O43172 522 aaKnown RBP eCLIP13.52□□□□□ -0.25
RPP40-201ENST00000319533 NDUFS3O75489 264 aa13.52□□□□□ -0.25
RPP40-201ENST00000319533 ELAVL4P26378 380 aaKnown RBP13.52□□□□□ -0.25
RPP40-201ENST00000319533 ARNTP27540 789 aa13.52□□□□□ -0.25
RPP40-201ENST00000319533 CMPK1P30085 196 aa13.52□□□□□ -0.25
RPP40-201ENST00000319533 NPY2RP49146 381 aa13.52□□□□□ -0.25
RPP40-201ENST00000319533 ADARP55265 1226 aaKnown RBP13.52□□□□□ -0.25
RPP40-201ENST00000319533 ARF3P61204 181 aaPredicted RBP13.52□□□□□ -0.25
RPP40-201ENST00000319533 ART3Q13508 389 aa13.52□□□□□ -0.25
RPP40-201ENST00000319533 TYSND1Q2T9J0 566 aa13.52□□□□□ -0.25
RPP40-201ENST00000319533 GARNL3Q5VVW2 1013 aa13.52□□□□□ -0.25
RPP40-201ENST00000319533 PAQR7Q86WK9 346 aa13.52□□□□□ -0.25
RPP40-201ENST00000319533 PRSS58Q8IYP2 241 aa13.52□□□□□ -0.25
RPP40-201ENST00000319533 AMER3Q8N944 861 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms