RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 IFFO1Q0D2I5 559 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 ELOAQ14241 798 aaKnown RBP7.55□□□□□ -1.2
CDC42-201ENST00000315554 ARHGAP19Q14CB8 494 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 TGFBIQ15582 683 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 PTCHD3Q3KNS1 767 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 LGSNQ5TDP6 509 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 PRAMEF13Q5VWM6 474 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 C16orf46Q6P387 395 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 ISCA2Q86U28 154 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 OR1L3Q8NH93 324 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 HMGCLL1Q8TB92 370 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 MZB1Q8WU39 189 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 ZCCHC14Q8WYQ9 949 aaKnown RBP7.55□□□□□ -1.2
CDC42-201ENST00000315554 ISL2Q96A47 359 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 KIAA1191Q96A73 305 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 SLC22A18Q96BI1 424 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 TSNARE1Q96NA8 513 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 CNTNAP3BQ96NU0 1288 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 GPR78Q96P69 363 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 TAAR9Q96RI9 348 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 TMEM79Q9BSE2 394 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 CNTNAP3Q9BZ76 1288 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 PDE7BQ9NP56 450 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 FGF21Q9NSA1 209 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 STARD5Q9NSY2 213 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 INTS7Q9NVH2 962 aaKnown RBP7.55□□□□□ -1.2
CDC42-201ENST00000315554 IRAK4Q9NWZ3 460 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 GEMIN8Q9NWZ8 242 aaKnown RBP7.55□□□□□ -1.2
CDC42-201ENST00000315554 WWOXQ9NZC7 414 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 SEMA5BQ9P283 1151 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 CPSF2Q9P2I0 782 aaKnown RBP7.55□□□□□ -1.2
CDC42-201ENST00000315554 BTRCQ9Y297 605 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 ASB1Q9Y576 335 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 PCDHGA8Q9Y5G5 932 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 IGKV1-8A0A0C4DH67 115 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 A0A0J9YVX5 310 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 LRRC14BA6NHZ5 514 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 CDRT15L2A8MXV6 281 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 B4E171 279 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 H7BY64 318 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 HAT1O14929 419 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 TAPBPO15533 448 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 CTSVO60911 334 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 KERAO60938 352 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 WDR47O94967 919 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 MT-ND3P03897 115 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 S100BP04271 92 aaPredicted RBP7.55□□□□□ -1.2
CDC42-201ENST00000315554 NTRK1P04629 796 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 CDH1P12830 882 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 KRT15P19012 456 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 TSPAN7P41732 249 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 HSPA7P48741 367 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 AGTR2P50052 363 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 FOXK2Q01167 660 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 MEF2AQ02078 507 aaPredicted RBP7.55□□□□□ -1.2
CDC42-201ENST00000315554 TGIF1Q15583 401 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 FAM83EQ2M2I3 478 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 TBC1D25Q3MII6 688 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 TMTC4Q5T4D3 741 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 DCAF12Q5T6F0 453 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 CAPN13Q6MZZ7 669 aaPredicted RBP7.55□□□□□ -1.2
CDC42-201ENST00000315554 PWWP2BQ6NUJ5 590 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 CLEC14AQ86T13 490 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 THOC6Q86W42 341 aaKnown RBP7.55□□□□□ -1.2
CDC42-201ENST00000315554 KMT5CQ86Y97 462 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 C4orf33Q8N1A6 199 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 DNAJC22Q8N4W6 341 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 MREGQ8N565 214 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 OR56A3Q8NH54 315 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 STAG3L4Q8TBR4 150 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 ATL1Q8WXF7 558 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 ANKRD7Q92527 254 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 N4BP2L2Q92802 583 aaPredicted RBP7.55□□□□□ -1.2
CDC42-201ENST00000315554 RHBDF1Q96CC6 855 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 ZNF501Q96CX3 271 aaPredicted RBP7.55□□□□□ -1.2
CDC42-201ENST00000315554 TCTN2Q96GX1 697 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 PRAP1Q96NZ9 151 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 OR4K3Q96R72 315 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 ATOH8Q96SQ7 321 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 SPRTNQ9H040 489 aaPredicted RBP7.55□□□□□ -1.2
CDC42-201ENST00000315554 C12orf65Q9H3J6 166 aaKnown RBP7.55□□□□□ -1.2
CDC42-201ENST00000315554 SYNPO2LQ9H987 977 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 ACSS2Q9NR19 701 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 FBXO8Q9NRD0 319 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 THSD1Q9NS62 852 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 XPR1Q9UBH6 696 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 FETUBQ9UGM5 382 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 RARRES3Q9UL19 164 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 G3BP2Q9UN86 482 aaKnown RBP7.55□□□□□ -1.2
CDC42-201ENST00000315554 SLC22A14Q9Y267 594 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 RAXQ9Y2V3 346 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 ADAMTS20P59510 1910 aa7.55□□□□□ -1.2
CDC42-201ENST00000315554 LOC105369274A0A096LPK9 316 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 LOC102723532A0A0G2JNH3 316 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 FEZF1A0PJY2 475 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 TAF4O00268 1085 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 CCNT2O60583 730 aaKnown RBP7.54□□□□□ -1.2
CDC42-201ENST00000315554 DXOO77932 396 aaKnown RBP7.54□□□□□ -1.2
CDC42-201ENST00000315554 KIAA0754O94854 1291 aa7.54□□□□□ -1.2
CDC42-201ENST00000315554 CCNDBP1O95273 360 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms