RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 PCCBP05166 539 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 GNAO1P09471 354 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 TCF3P15923 654 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 ZNF8P17098 575 aaPredicted RBP12.03□□□□□ -0.48
RNF4-201ENST00000314289 P2RY2P41231 377 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 ERVK-21P61565 698 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 FOXM1Q08050 763 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 OR4F3Q6IEY1 312 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 ERMP1Q7Z2K6 904 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 TMPRSS11BQ86T26 416 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 CHPFQ8IZ52 775 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 ALDH16A1Q8IZ83 802 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 SMYD1Q8NB12 490 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 OR7A2PQ8NGA2 310 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 NEIL2Q969S2 332 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 ZUFSPQ96AP4 578 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 TIFAQ96CG3 184 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 ZNF583Q96ND8 569 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 OSBPL6Q9BZF3 934 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 TMEM245Q9H330 911 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 CLMPQ9H6B4 373 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 SFXN1Q9H9B4 322 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 PRSS16Q9NQE7 514 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 SERGEFQ9UGK8 458 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 DOLKQ9UPQ8 538 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 SH3GLB1Q9Y371 365 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 PCDHB14Q9Y5E9 798 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 RNF103-CHMP3A0A140T963 221 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 TCRBV5S2A0A599 114 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 MAGEB17A8MXT2 336 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 LATO43561 262 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 AP2A2O94973 939 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 PCDH8O95206 1070 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 CATP04040 527 aaKnown RBP12.03□□□□□ -0.48
RNF4-201ENST00000314289 MAGEA8P43361 318 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 AP1S2P56377 157 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 ESRRGP62508 458 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 PPP2R2DQ66LE6 453 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 CLEC4FQ8N1N0 589 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 DPP10Q8N608 796 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 PNPT1Q8TCS8 783 aaKnown RBP12.03□□□□□ -0.48
RNF4-201ENST00000314289 FGF14Q92915 247 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 C12orf43Q96C57 262 aaKnown RBP12.03□□□□□ -0.48
RNF4-201ENST00000314289 VPS50Q96JG6 964 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 TRIM15Q9C019 465 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 SLC6A17Q9H1V8 727 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 CLK4Q9HAZ1 481 aaKnown RBP12.03□□□□□ -0.48
RNF4-201ENST00000314289 PLGRKTQ9HBL7 147 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 KLHL42Q9P2K6 505 aa12.03□□□□□ -0.48
RNF4-201ENST00000314289 MAGED1Q9Y5V3 778 aaPredicted RBP12.03□□□□□ -0.48
RNF4-201ENST00000314289 IGLON5A6NGN9 336 aa12.02□□□□□ -0.48
RNF4-201ENST00000314289 AQP12BA6NM10 295 aa12.02□□□□□ -0.48
RNF4-201ENST00000314289 POP7O75817 140 aaKnown RBP12.02□□□□□ -0.48
RNF4-201ENST00000314289 KAT7O95251 611 aa12.02□□□□□ -0.48
RNF4-201ENST00000314289 MYCLP1P12525 358 aaPredicted RBP12.02□□□□□ -0.48
RNF4-201ENST00000314289 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.02□□□□□ -0.48
RNF4-201ENST00000314289 FAM83HQ6ZRV2 1179 aaPredicted RBP12.02□□□□□ -0.48
RNF4-201ENST00000314289 ERN2Q76MJ5 926 aaKnown RBP12.02□□□□□ -0.48
RNF4-201ENST00000314289 AQP12AQ8IXF9 295 aa12.02□□□□□ -0.48
RNF4-201ENST00000314289 ZNF480Q8WV37 535 aa12.02□□□□□ -0.48
RNF4-201ENST00000314289 ISOC1Q96CN7 298 aa12.02□□□□□ -0.48
RNF4-201ENST00000314289 VPS35Q96QK1 796 aa12.02□□□□□ -0.48
RNF4-201ENST00000314289 SLC29A3Q9BZD2 475 aa12.02□□□□□ -0.48
RNF4-201ENST00000314289 PAIP1Q9H074 479 aaKnown RBP12.02□□□□□ -0.48
RNF4-201ENST00000314289 CARS2Q9HA77 564 aaKnown RBP12.02□□□□□ -0.48
RNF4-201ENST00000314289 SGK2Q9HBY8 427 aa12.02□□□□□ -0.48
RNF4-201ENST00000314289 ATG2AQ2TAZ0 1938 aa12.02□□□□□ -0.48
RNF4-201ENST00000314289 NPC1O15118 1278 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 MID1O15344 667 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 FASP25445 335 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 S100A3P33764 101 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 MRPL19P49406 292 aaKnown RBP12.02□□□□□ -0.49
RNF4-201ENST00000314289 MAPK10P53779 464 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 EEFSECP57772 596 aaKnown RBP12.02□□□□□ -0.49
RNF4-201ENST00000314289 MAD2L1Q13257 205 aaPredicted RBP12.02□□□□□ -0.49
RNF4-201ENST00000314289 SLC14A1Q13336 389 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 SP140Q13342 867 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 RUNX3Q13761 415 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 COL9A2Q14055 689 aaPredicted RBP12.02□□□□□ -0.49
RNF4-201ENST00000314289 OTUD3Q5T2D3 398 aaPredicted RBP12.02□□□□□ -0.49
RNF4-201ENST00000314289 IER5LQ5T953 404 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 NOXRED1Q6NXP6 359 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 TTC33Q6PID6 262 aaPredicted RBP12.02□□□□□ -0.49
RNF4-201ENST00000314289 PARM1Q6UWI2 310 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 ENPP6Q6UWR7 440 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 GALNT10Q86SR1 603 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 TCAIMQ8N3R3 496 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 L3MBTL4Q8NA19 623 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 OR2T12Q8NG77 320 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 FBXL8Q96CD0 374 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 NSMCE2Q96MF7 247 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 MYOCQ99972 504 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 FAIMQ9NVQ4 179 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 ARMC1Q9NVT9 282 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 ANAPC2Q9UJX6 822 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 CNOT11Q9UKZ1 510 aaKnown RBP12.02□□□□□ -0.49
RNF4-201ENST00000314289 BLOC1S6Q9UL45 172 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 INVSQ9Y283 1065 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 OR1A2Q9Y585 309 aa12.02□□□□□ -0.49
RNF4-201ENST00000314289 SH3PXD2BA1X283 911 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms