RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 WHRNQ9P202 907 aa13.95□□□□□ -0.18
PPP1CA-201ENST00000312989 CORO1CQ9ULV4 474 aaPredicted RBP13.95□□□□□ -0.18
PPP1CA-201ENST00000312989 VSTM2BA6NLU5 285 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 C9J4A7 227 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 H0YGG7 62 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 J3QKU1 62 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 MASP2O00187 686 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 P2RX6O15547 441 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 ZBTB14O43829 449 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 RPA3P35244 121 aaPredicted RBP13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 ARSFP54793 590 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 ARF3P61204 181 aaPredicted RBP13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 RELAQ04206 551 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 MGAT5Q09328 741 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 PPP1R3AQ16821 1122 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 LACTB2Q53H82 288 aaPredicted RBP13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 MLIPQ5VWP3 458 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 LRRC8EQ6NSJ5 796 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 SBSNQ6UWP8 590 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 OVCH1Q7RTY7 1134 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 SHISA5Q8N114 240 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 SGPP1Q9BX95 441 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 TRIM4Q9C037 500 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 DPH5Q9H2P9 285 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 TXLNGQ9NUQ3 528 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 IFT80Q9P2H3 777 aaPredicted RBP13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 CTSFQ9UBX1 484 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 VWA7Q9Y334 891 aa13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 PTRH2Q9Y3E5 179 aaKnown RBP13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 PCDHGA9Q9Y5G4 932 aaKnown RBP13.94□□□□□ -0.18
PPP1CA-201ENST00000312989 IGLV3-12A0A075B6K2 115 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 HYKKA2RU49 373 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 CXorf49A8MYA2 514 aaPredicted RBP13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 HAT1O14929 419 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 SLC16A5O15375 505 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 FOXS1O43638 330 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 SYF2O95926 243 aaKnown RBP13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 C8GP07360 202 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 ZNF37AP17032 561 aaPredicted RBP13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 SSTR1P30872 391 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 CASQ1P31415 396 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 OR1D4P47884 311 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 EFNA3P52797 238 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 GPX6P59796 221 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 ABATP80404 500 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 ZNF460Q14592 562 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 SSPNQ14714 243 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 HKDC1Q2TB90 917 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 COLEC12Q5KU26 742 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 FAM45BPQ6NSW5 357 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 UGT3A1Q6NUS8 523 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 PRICKLE2Q7Z3G6 844 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 VN1R4Q7Z5H5 301 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 SLC26A11Q86WA9 606 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 PLD3Q8IV08 490 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 ZBED8Q8IZ13 594 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 METTL27Q8N6F8 245 aaPredicted RBP13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 GPATCH11Q8N954 259 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 FAM45AQ8TCE6 357 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 ANKRD49Q8WVL7 239 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 PDLIM5Q96HC4 596 aaKnown RBP13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 OR4K3Q96R72 315 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 C17orf62Q9BQA9 187 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 NUDT9Q9BW91 350 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 WDR54Q9H977 334 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 PARVBQ9HBI1 364 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 RUVBL1Q9Y265 456 aaKnown RBP13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 PADI2Q9Y2J8 665 aa13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 MRPS2Q9Y399 296 aaKnown RBP13.93□□□□□ -0.18
PPP1CA-201ENST00000312989 MKRN2OSH3BPM6 223 aa13.92□□□□□ -0.18
PPP1CA-201ENST00000312989 ALBP02768 609 aa13.92□□□□□ -0.18
PPP1CA-201ENST00000312989 EZRP15311 586 aaKnown RBP13.92□□□□□ -0.18
PPP1CA-201ENST00000312989 ALAS2P22557 587 aa13.92□□□□□ -0.18
PPP1CA-201ENST00000312989 CASRP41180 1078 aa13.92□□□□□ -0.18
PPP1CA-201ENST00000312989 EMP3P54852 163 aa13.92□□□□□ -0.18
PPP1CA-201ENST00000312989 TAS2R39P59534 338 aa13.92□□□□□ -0.18
PPP1CA-201ENST00000312989 NAA25Q14CX7 972 aa13.92□□□□□ -0.18
PPP1CA-201ENST00000312989 AGTRAPQ6RW13 159 aa13.92□□□□□ -0.18
PPP1CA-201ENST00000312989 ATG14Q6ZNE5 492 aa13.92□□□□□ -0.18
PPP1CA-201ENST00000312989 CEP97Q8IW35 865 aa13.92□□□□□ -0.18
PPP1CA-201ENST00000312989 FDCSPQ8NFU4 85 aa13.92□□□□□ -0.18
PPP1CA-201ENST00000312989 CCDC138Q96M89 665 aa13.92□□□□□ -0.18
PPP1CA-201ENST00000312989 PHACTR1Q9C0D0 580 aa13.92□□□□□ -0.18
PPP1CA-201ENST00000312989 PPANQ9NQ55 473 aaKnown RBP13.92□□□□□ -0.18
PPP1CA-201ENST00000312989 IRAK4Q9NWZ3 460 aa13.92□□□□□ -0.18
PPP1CA-201ENST00000312989 SEC16AO15027 2179 aa13.92□□□□□ -0.18
PPP1CA-201ENST00000312989 TCRBV9S1A1TA0A576 114 aa13.91□□□□□ -0.18
PPP1CA-201ENST00000312989 ZNF839A8K0R7 811 aa13.91□□□□□ -0.18
PPP1CA-201ENST00000312989 H7BY64 318 aa13.91□□□□□ -0.18
PPP1CA-201ENST00000312989 SOCS6O14544 535 aa13.91□□□□□ -0.18
PPP1CA-201ENST00000312989 EIF3HO15372 352 aaKnown RBP eCLIP13.91□□□□□ -0.18
PPP1CA-201ENST00000312989 OTX2P32243 289 aa13.91□□□□□ -0.18
PPP1CA-201ENST00000312989 FOLR3P41439 243 aa13.91□□□□□ -0.18
PPP1CA-201ENST00000312989 RGS4P49798 205 aa13.91□□□□□ -0.18
PPP1CA-201ENST00000312989 CSNK1G2P78368 415 aa13.91□□□□□ -0.18
PPP1CA-201ENST00000312989 TLE1Q04724 770 aa13.91□□□□□ -0.18
PPP1CA-201ENST00000312989 PRAMEF13Q5VWM6 474 aa13.91□□□□□ -0.18
PPP1CA-201ENST00000312989 ASB18Q6ZVZ8 466 aa13.91□□□□□ -0.18
PPP1CA-201ENST00000312989 MED25Q71SY5 747 aa13.91□□□□□ -0.18
PPP1CA-201ENST00000312989 STRA8Q7Z7C7 330 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms