RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 FUBP1Q96AE4 644 aaKnown RBP17.54■□□□□ 0.4
SPSB4-201ENST00000310546 SIRT5Q9NXA8 310 aa17.54■□□□□ 0.4
SPSB4-201ENST00000310546 TRAPPC4Q9Y296 219 aa17.54■□□□□ 0.4
SPSB4-201ENST00000310546 CNPP09543 421 aaKnown RBP17.54■□□□□ 0.4
SPSB4-201ENST00000310546 PRKAR2AP13861 404 aaKnown RBP17.54■□□□□ 0.4
SPSB4-201ENST00000310546 DNAJA1P31689 397 aaKnown RBP17.54■□□□□ 0.4
SPSB4-201ENST00000310546 PRIM2P49643 509 aa17.54■□□□□ 0.4
SPSB4-201ENST00000310546 CPT1AP50416 773 aa17.54■□□□□ 0.4
SPSB4-201ENST00000310546 HOXC5Q00444 222 aa17.54■□□□□ 0.4
SPSB4-201ENST00000310546 SREBF2Q12772 1141 aa17.54■□□□□ 0.4
SPSB4-201ENST00000310546 ZNF79Q15937 498 aa17.54■□□□□ 0.4
SPSB4-201ENST00000310546 KYAT1Q16773 422 aa17.54■□□□□ 0.4
SPSB4-201ENST00000310546 GDF6Q6KF10 455 aaPredicted RBP17.54■□□□□ 0.4
SPSB4-201ENST00000310546 CAMKK1Q8N5S9 505 aa17.54■□□□□ 0.4
SPSB4-201ENST00000310546 KRTCAP2Q8N6L1 136 aa17.54■□□□□ 0.4
SPSB4-201ENST00000310546 CLHC1Q8NHS4 586 aa17.54■□□□□ 0.4
SPSB4-201ENST00000310546 NT5MQ9NPB1 228 aa17.54■□□□□ 0.4
SPSB4-201ENST00000310546 ZNF490Q9ULM2 529 aaPredicted RBP17.54■□□□□ 0.4
SPSB4-201ENST00000310546 PCDHGA6Q9Y5G7 932 aa17.54■□□□□ 0.4
SPSB4-201ENST00000310546 C17orf102A2RUQ5 167 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 FADS2P1A8MWK0 482 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 B4DXG7 233 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 WDR47O94967 919 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 CDK1P06493 297 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 NAGAP17050 411 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 NRIP1P48552 1158 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 TGM4P49221 684 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 GZMKP49863 264 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 ARRDC4Q8NCT1 418 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 BRSK1Q8TDC3 778 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 ASB15Q8WXK1 588 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 C11orf54Q9H0W9 315 aaPredicted RBP17.53■□□□□ 0.4
SPSB4-201ENST00000310546 C1orf109Q9NX04 203 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 SPASTQ9UBP0 616 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 TSR3Q9UJK0 312 aaKnown RBP17.53■□□□□ 0.4
SPSB4-201ENST00000310546 TIMM13Q9Y5L4 95 aaPredicted RBP17.53■□□□□ 0.4
SPSB4-201ENST00000310546 V9GYH0 126 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 CLCA1A8K7I4 914 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 MUSKO15146 869 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 PGRP06401 933 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 PIRTP0C851 137 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 AKR1A1P14550 325 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 MLLT3P42568 568 aaPredicted RBP17.53■□□□□ 0.4
SPSB4-201ENST00000310546 DAOAP59103 153 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 HSPA14Q0VDF9 509 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 ZNF648Q5T619 568 aaPredicted RBP17.53■□□□□ 0.4
SPSB4-201ENST00000310546 PAQR9Q6ZVX9 377 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 VTCN1Q7Z7D3 282 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 PLCZ1Q86YW0 608 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 CD99L2Q8TCZ2 262 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 PEX13Q92968 403 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 OR52E6Q96RD3 313 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 CNPPD1Q9BV87 410 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 RAD18Q9NS91 495 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 CD274Q9NZQ7 290 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 VPS4AQ9UN37 437 aa17.53■□□□□ 0.4
SPSB4-201ENST00000310546 RRN3P2A6NIE6 340 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 H3BM21 787 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 STX7O15400 261 aaKnown RBP17.52■□□□□ 0.4
SPSB4-201ENST00000310546 PDPK1O15530 556 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 TNFRSF21O75509 655 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 EPN2O95208 641 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 DARSP14868 501 aaKnown RBP17.52■□□□□ 0.4
SPSB4-201ENST00000310546 ST3GAL4Q11206 333 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 TSTQ16762 297 aaKnown RBP17.52■□□□□ 0.4
SPSB4-201ENST00000310546 C5orf22Q49AR2 442 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 PIK3R6Q5UE93 754 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 ZNF767PQ75MW2 155 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 GET4Q7L5D6 327 aaPredicted RBP17.52■□□□□ 0.4
SPSB4-201ENST00000310546 ANKRD46Q86W74 232 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 FAM217AQ8IXS0 508 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 VWA5B2Q8N398 1253 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 DNAJC22Q8N4W6 341 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 OR10T2Q8NGX3 314 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 VANGL1Q8TAA9 524 aaPredicted RBP17.52■□□□□ 0.4
SPSB4-201ENST00000310546 BLOC1S5Q8TDH9 187 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 C17orf62Q9BQA9 187 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 GABARAPL1Q9H0R8 117 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 RNF121Q9H920 327 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 ZNF556Q9HAH1 456 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 GLTPQ9NZD2 209 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 SLC23A1Q9UHI7 598 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 ZMYM5Q9UJ78 669 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 NUP50Q9UKX7 468 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 ARL5AQ9Y689 179 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 ZNF236Q9UL36 1845 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 A8MUA0 341 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 ARHGEF15O94989 841 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 ASGR1P07306 291 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 FPR1P21462 350 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 WEE1P30291 646 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 PIK3CGP48736 1102 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 VLDLRP98155 873 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 SMARCB1Q12824 385 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 FBXO43Q4G163 708 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 GALNT6Q8NCL4 622 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 OR8H1Q8NGG4 311 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 HASPINQ8TF76 798 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 AIFM2Q9BRQ8 373 aa17.52■□□□□ 0.4
SPSB4-201ENST00000310546 FAM83DQ9H4H8 585 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms