RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 JAGN1Q8N5M9 183 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 CAMKVQ8NCB2 501 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 FNIP2Q9P278 1114 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 PDLIM1O00151 329 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 PSMD10O75832 226 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 GABRR2P28476 465 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 ADCYAP1R1P41586 468 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 RPS14P62263 151 aaKnown RBP15.12■□□□□ 0.01
HCFC1-201ENST00000310441 TOR1AIP1Q5JTV8 583 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 SH3PXD2AQ5TCZ1 1133 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 CLEC6AQ6EIG7 209 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 P4HA3Q7Z4N8 544 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 OR14C36Q8NHC7 312 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 KCTD13Q8WZ19 329 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 DMRTB1Q96MA1 342 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 POLMQ9NP87 494 aaPredicted RBP15.12■□□□□ 0.01
HCFC1-201ENST00000310441 IFNA10P01566 189 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 IGFBP4P22692 258 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 CDKN2BP42772 138 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 REM2Q8IYK8 340 aaPredicted RBP15.12■□□□□ 0.01
HCFC1-201ENST00000310441 FAM86B1Q8N7N1 296 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 C12orf29Q8N999 325 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 ZNF431Q8TF32 576 aaPredicted RBP15.12■□□□□ 0.01
HCFC1-201ENST00000310441 RDH12Q96NR8 316 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 C12orf65Q9H3J6 166 aaKnown RBP15.12■□□□□ 0.01
HCFC1-201ENST00000310441 FAM105AQ9NUU6 356 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 TAS2R3Q9NYW6 316 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 ARPC4-TTLL3A0A0A6YYG9 625 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 SOX30O94993 753 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 HSPA7P48741 367 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 IDH3AP50213 366 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 ZNF41P51814 821 aaPredicted RBP15.12■□□□□ 0.01
HCFC1-201ENST00000310441 OR12D2P58182 307 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 ZNF181Q2M3W8 571 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 TPRG1LQ5T0D9 272 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 ANKRD46Q86W74 232 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 CD300LFQ8TDQ1 290 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 TREX2Q9BQ50 279 aaPredicted RBP15.12■□□□□ 0.01
HCFC1-201ENST00000310441 ABCG8Q9H221 673 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 TFB2MQ9H5Q4 396 aaKnown RBP15.12■□□□□ 0.01
HCFC1-201ENST00000310441 TEX13DA0A0J9YY54 714 aaPredicted RBP15.12■□□□□ 0.01
HCFC1-201ENST00000310441 TARBP2Q15633 366 aaKnown RBP15.12■□□□□ 0.01
HCFC1-201ENST00000310441 BCL2A1Q16548 175 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 FBXO22Q8NEZ5 403 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 ATG10Q9H0Y0 220 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 PCDHB11Q9Y5F2 797 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 ATRNO75882 1429 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 A0A1W2PQH9 124 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 EEFSECP57772 596 aaKnown RBP15.12■□□□□ 0.01
HCFC1-201ENST00000310441 ACTR1AP61163 376 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 TLE2Q04725 743 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 RALGPS1Q5JS13 557 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 VRK1Q99986 396 aaPredicted RBP15.12■□□□□ 0.01
HCFC1-201ENST00000310441 EFCAB11Q9BUY7 163 aa15.12■□□□□ 0.01
HCFC1-201ENST00000310441 BANF1O75531 89 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 PTPRAP18433 802 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 NBPF12Q5TAG4 269 aaPredicted RBP15.11■□□□□ 0.01
HCFC1-201ENST00000310441 PGM2L1Q6PCE3 622 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 PSRC1Q6PGN9 363 aaPredicted RBP15.11■□□□□ 0.01
HCFC1-201ENST00000310441 GET4Q7L5D6 327 aaPredicted RBP15.11■□□□□ 0.01
HCFC1-201ENST00000310441 SLC37A3Q8NCC5 494 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 FAM163AQ96GL9 167 aaPredicted RBP15.11■□□□□ 0.01
HCFC1-201ENST00000310441 DUS2Q9NX74 493 aaKnown RBP15.11■□□□□ 0.01
HCFC1-201ENST00000310441 TLR4O00206 839 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 AGRPO00253 132 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 HTR1AP08908 422 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 DECR1Q16698 335 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 SLC8B1Q6J4K2 584 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 OR10G2Q8NGC3 310 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 OR52E4Q8NGH9 312 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 EBPLQ9BY08 206 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 VNN2O95498 520 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 EPHX1P07099 455 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 CD83Q01151 205 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 HMBOX1Q6NT76 420 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 MON1BQ7L1V2 547 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 LAS2Q8IYD9 372 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 SMARCD2Q92925 531 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 C7orf50Q9BRJ6 194 aaKnown RBP15.11■□□□□ 0.01
HCFC1-201ENST00000310441 DLGAP1O14490 977 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 L1CAMP32004 1257 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 SLC18A1P54219 525 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 MFSD8Q8NHS3 518 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 BPIFB1Q8TDL5 484 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 ADAD1Q96M93 576 aaKnown RBP15.11■□□□□ 0.01
HCFC1-201ENST00000310441 GAS2L1Q99501 681 aaPredicted RBP15.11■□□□□ 0.01
HCFC1-201ENST00000310441 TXN2Q99757 166 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 SEZ6LQ9BYH1 1024 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 E2F3O00716 465 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 BORCS7Q96B45 105 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 PACSIN3Q9UKS6 424 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 NELFEP18615 380 aaKnown RBP15.11■□□□□ 0.01
HCFC1-201ENST00000310441 AADACL2Q6P093 401 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 NRSN1Q8IZ57 195 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 LENG8Q96PV6 779 aaPredicted RBP15.11■□□□□ 0.01
HCFC1-201ENST00000310441 CMKLR1Q99788 373 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 OR2B2Q9GZK3 357 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 ANKRD63C9JTQ0 380 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 WNT10BO00744 389 aa15.11■□□□□ 0.01
HCFC1-201ENST00000310441 MSX2P35548 267 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms