RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 RBFAQ8N0V3 343 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 PACRGLQ8N7B6 248 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 C12orf76Q8N812 135 aaPredicted RBP7.99□□□□□ -1.13
VPS41-202ENST00000310301 FAM3CQ92520 227 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 TMEM203Q969S6 136 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 AP2M1Q96CW1 435 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 ASB9Q96DX5 294 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 EXOC2Q96KP1 924 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 PHOX2BQ99453 314 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 SLC30A2Q9BRI3 323 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 COMMD4Q9H0A8 199 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 ADAM7Q9H2U9 754 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 GDAP2Q9NXN4 497 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 UBQLN2Q9UHD9 624 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 RPL36Q9Y3U8 105 aaKnown RBP7.99□□□□□ -1.13
VPS41-202ENST00000310301 CMAHPQ9Y471 501 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 PIAS3Q9Y6X2 628 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 SCN4AP35499 1836 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 XPNPEP2O43895 674 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 OR1I1O60431 355 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 GPR32O75388 356 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 CD72P21854 359 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 GNALP38405 381 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 MAGEA8P43361 318 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 YBEYP58557 167 aaPredicted RBP7.99□□□□□ -1.13
VPS41-202ENST00000310301 TSTQ16762 297 aaKnown RBP7.99□□□□□ -1.13
VPS41-202ENST00000310301 RFTN2Q52LD8 501 aaPredicted RBP7.99□□□□□ -1.13
VPS41-202ENST00000310301 EMC10Q5UCC4 262 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 ZNF563Q8TA94 476 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 PCED1BQ96HM7 432 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 WACQ9BTA9 647 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 TM6SF2Q9BZW4 377 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 IPPKQ9H8X2 491 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 M0R233 179 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 NPHS1O60500 1241 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 FGF1P05230 155 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 ZNF14P17017 642 aaPredicted RBP7.99□□□□□ -1.13
VPS41-202ENST00000310301 CD247P20963 164 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 CPN2P22792 545 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 MATKP42679 507 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 ASMTP46597 345 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 CXCL12P48061 93 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 ZNF81P51508 661 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 ZNF404Q494X3 552 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 IFI44LQ53G44 452 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 SMARCD3Q6STE5 483 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 ZNF627Q7L945 461 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 THAP6Q8TBB0 222 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 ADAMTS15Q8TE58 950 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 CANT1Q8WVQ1 401 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 ISOC1Q96CN7 298 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 PCYT2Q99447 389 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 TMEM27Q9HBJ8 222 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 MARK1Q9P0L2 795 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 RCOR3Q9P2K3 495 aaPredicted RBP7.99□□□□□ -1.13
VPS41-202ENST00000310301 MTMR11A4FU01 709 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 AQP12BA6NM10 295 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 XKRYO14609 159 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 PGAM2P15259 253 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 DRD1P21728 446 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 FNTBP49356 437 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 CXCR3P49682 368 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 ZNF132P52740 706 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 PPP3R1P63098 170 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 RPP38P78345 283 aaKnown RBP7.99□□□□□ -1.13
VPS41-202ENST00000310301 ILF3Q12906 894 aaKnown RBP eCLIP7.99□□□□□ -1.13
VPS41-202ENST00000310301 LCP2Q13094 533 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 FSTL4Q6MZW2 842 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 AQP12AQ8IXF9 295 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 OXR1Q8N573 874 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 C9orf43Q8TAL5 461 aaPredicted RBP7.99□□□□□ -1.13
VPS41-202ENST00000310301 CLP1Q92989 425 aaKnown RBP7.99□□□□□ -1.13
VPS41-202ENST00000310301 TBX5Q99593 518 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 TTLL2Q9BWV7 592 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 SLC39A1Q9NY26 324 aa7.99□□□□□ -1.13
VPS41-202ENST00000310301 RGPD3A6NKT7 1758 aaPredicted RBP7.98□□□□□ -1.13
VPS41-202ENST00000310301 RGPD4Q7Z3J3 1758 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 DAPL1A0PJW8 107 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 CLDN5O00501 218 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 SMAD9O15198 467 aaKnown RBP7.98□□□□□ -1.13
VPS41-202ENST00000310301 CILPO75339 1184 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 RPP40O75818 363 aaKnown RBP7.98□□□□□ -1.13
VPS41-202ENST00000310301 CLDN9O95484 217 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 GTF2H2Q13888 395 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 PRKD1Q15139 912 aaPredicted RBP7.98□□□□□ -1.13
VPS41-202ENST00000310301 GRK1Q15835 563 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 UGT8Q16880 541 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 ARSHQ5FYA8 562 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 TMEM236Q5W0B7 351 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 RAET1GQ6H3X3 334 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 GTF2H2CQ6P1K8 395 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 LRRC57Q8N9N7 239 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 ACOT12Q8WYK0 555 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 PFDN5Q99471 154 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 FUZQ9BT04 418 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 OR2B2Q9GZK3 357 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 OR51V1Q9H2C8 321 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 PADI2Q9Y2J8 665 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 MYH3P11055 1940 aa7.98□□□□□ -1.13
VPS41-202ENST00000310301 ANKRD36CQ5JPF3 1778 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms