RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 DCAF12Q5T6F0 453 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 KIAA1614Q5VZ46 1190 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 TRIM73Q86UV7 250 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 C4orf33Q8N1A6 199 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 GOLGA6L1Q8N7Z2 621 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 BMPERQ8N8U9 685 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 BANPQ8N9N5 519 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 SLC5A11Q8WWX8 675 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 THAP11Q96EK4 314 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 DPH7Q9BTV6 452 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 PELI2Q9HAT8 420 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 ZNF358Q9NW07 568 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 TMEM216Q9P0N5 145 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 RARRES3Q9UL19 164 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 PLCL2Q9UPR0 1127 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 SLC22A14Q9Y267 594 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 PCDHGA7Q9Y5G6 932 aa17.21■□□□□ 0.35
SSSCA1-201ENST00000309328 SPTBN2O15020 2390 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 TXNDC9O14530 226 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 CLGNO14967 610 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 EPB42P16452 691 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 GSTM2P28161 218 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 HSPA7P48741 367 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 ERVPABLB-1P60509 514 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 PCDH1Q08174 1060 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 ASPHQ12797 758 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 TUBB3Q13509 450 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 TCTE1Q5JU00 501 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 ZNF425Q6IV72 752 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 PTGR2Q8N8N7 351 aaPredicted RBP17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 SREK1Q8WXA9 508 aaKnown RBP17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 PYCR2Q96C36 320 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 SEC16BQ96JE7 1060 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 MAGEB10Q96LZ2 347 aaPredicted RBP17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 SLC46A1Q96NT5 459 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 ZFYVE21Q9BQ24 234 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 TMEM79Q9BSE2 394 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 ENAMQ9NRM1 1142 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 THSD1Q9NS62 852 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 FGF21Q9NSA1 209 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 ABCF3Q9NUQ8 709 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 SLC39A1Q9NY26 324 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 SERTAD3Q9UJW9 196 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 PLLPQ9Y342 182 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 ANGPTL3Q9Y5C1 460 aa17.2■□□□□ 0.34
SSSCA1-201ENST00000309328 NVLO15381 856 aaKnown RBP17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 TAPBPO15533 448 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 CCNT2O60583 730 aaKnown RBP17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 PLIN3O60664 434 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 UGDHO60701 494 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 TOP3BO95985 862 aaKnown RBP17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 MYL2P10916 166 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 FGF3P11487 239 aaPredicted RBP17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 FGF5P12034 268 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 PVRP15151 417 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 RPS15AP62244 130 aaKnown RBP17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 FOXM1Q08050 763 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 ZXDCQ2QGD7 858 aaPredicted RBP17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 PAGE2BQ5JRK9 111 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 YOD1Q5VVQ6 348 aaPredicted RBP17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 RNF44Q7L0R7 432 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 ADCK2Q7Z695 626 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 PPP1R3BQ86XI6 285 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 HOMEZQ8IX15 550 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 GPR135Q8IZ08 494 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 TMEM151AQ8N4L1 468 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 PPM1MQ96MI6 270 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 OR4K3Q96R72 315 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 OR6C1Q96RD1 312 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 AIF1LQ9BQI0 150 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 SARGQ9BW04 601 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 C1QTNF3Q9BXJ4 246 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 DKK4Q9UBT3 224 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 PISDQ9UG56 409 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 STK38LQ9Y2H1 464 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 AP1M2Q9Y6Q5 423 aa17.19■□□□□ 0.34
SSSCA1-201ENST00000309328 KCNE1BA0A087WTH5 132 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 TM9SF1O15321 606 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 H2AFYO75367 372 aaKnown RBP17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 TNFSF15O95150 251 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 PROCP04070 461 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 HBQ1P09105 142 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 EBLN1P0CF75 366 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 HERVK_113P63132 956 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 LAPTM5Q13571 262 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 TBCCQ15814 346 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 ATG9BQ674R7 924 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 FCRL6Q6DN72 434 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 TLDC1Q6P9B6 456 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 NXPE4Q6UWF7 544 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 ZYG11AQ6WRX3 759 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 CDHR3Q6ZTQ4 885 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 PAQR7Q86WK9 346 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 KRT78Q8N1N4 520 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 DNAJC22Q8N4W6 341 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 ZNF655Q8N720 491 aaPredicted RBP17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 SNX31Q8N9S9 440 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 CCDC63Q8NA47 563 aa17.18■□□□□ 0.34
SSSCA1-201ENST00000309328 TTLQ8NG68 377 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms