RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 CDH4P55283 916 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 VMACQ2NL98 169 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 VARS2Q5ST30 1063 aaKnown RBP13.1□□□□□ -0.31
SEC23A-201ENST00000307712 OR2T11Q8NH01 316 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 HMGCLL1Q8TB92 370 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 CLP1Q92989 425 aaKnown RBP13.1□□□□□ -0.31
SEC23A-201ENST00000307712 KCNH6Q9H252 994 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 TNKS2Q9H2K2 1166 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 ARNT2Q9HBZ2 717 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 GPR83Q9NYM4 423 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 DHRS7Q9Y394 339 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 KCNE2Q9Y6J6 123 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 SULT1C4O75897 302 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 IFNW1P05000 195 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 PSKH1P11801 424 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 JUNBP17275 347 aaPredicted RBP13.1□□□□□ -0.31
SEC23A-201ENST00000307712 IGFBP6P24592 240 aaPredicted RBP13.1□□□□□ -0.31
SEC23A-201ENST00000307712 ATN1P54259 1190 aaPredicted RBP13.1□□□□□ -0.31
SEC23A-201ENST00000307712 ANKS3Q6ZW76 656 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 USP45Q70EL2 814 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 KRT74Q7RTS7 529 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 DDX53Q86TM3 631 aaKnown RBP13.1□□□□□ -0.31
SEC23A-201ENST00000307712 TSPYL5Q86VY4 417 aaPredicted RBP13.1□□□□□ -0.31
SEC23A-201ENST00000307712 PTRH1Q86Y79 214 aaKnown RBP13.1□□□□□ -0.31
SEC23A-201ENST00000307712 TMEM151AQ8N4L1 468 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 CNDP2Q96KP4 475 aaKnown RBP13.1□□□□□ -0.31
SEC23A-201ENST00000307712 BARD1Q99728 777 aaKnown RBP13.1□□□□□ -0.31
SEC23A-201ENST00000307712 INPP5KQ9BT40 448 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 TTPALQ9BTX7 342 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 SLC22A4Q9H015 551 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 SLITRK5O94991 958 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 F2P00734 622 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 WEE1P30291 646 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 SEMA3AQ14563 771 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 DUOXA1Q1HG43 343 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 MARCH8Q5T0T0 291 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 C10orf62Q5T681 223 aaPredicted RBP13.1□□□□□ -0.31
SEC23A-201ENST00000307712 ZNF691Q5VV52 312 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 B3GNT8Q7Z7M8 397 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 PAPD5Q8NDF8 572 aaKnown RBP13.1□□□□□ -0.31
SEC23A-201ENST00000307712 BPIFB1Q8TDL5 484 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 ASPNQ9BXN1 380 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 CD244Q9BZW8 370 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 CCDC177Q9NQR7 707 aaPredicted RBP13.1□□□□□ -0.31
SEC23A-201ENST00000307712 DCAF13Q9NV06 445 aaKnown RBP13.1□□□□□ -0.31
SEC23A-201ENST00000307712 MS4A12Q9NXJ0 267 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 PCDHGB6Q9Y5F9 930 aa13.1□□□□□ -0.31
SEC23A-201ENST00000307712 A0A1B0GVM2 712 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 GPR39O43194 453 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 MAP2K5Q13163 448 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 AQP6Q13520 282 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 SMU1Q2TAY7 513 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 FRG2Q64ET8 278 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 MMAAQ8IVH4 418 aaKnown RBP13.09□□□□□ -0.31
SEC23A-201ENST00000307712 LRRC17Q8N6Y2 441 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 AP3S1Q92572 193 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 FRG2BQ96QU4 278 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 CAMKK2Q96RR4 588 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 FEVQ99581 238 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 OR51E2Q9H255 320 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 SLC32A1Q9H598 525 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 PCDHGA10Q9Y5H3 936 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 TLL1O43897 1013 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 CKMT1AP12532 417 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 CD72P21854 359 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 FSHRP23945 695 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 SPAM1P38567 509 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 C2orf80Q0P641 193 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 HKDC1Q2TB90 917 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 PTCHD3Q3KNS1 767 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 POM121L1PQ3SYA9 428 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 C5orf22Q49AR2 442 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 CRTC2Q53ET0 693 aaPredicted RBP13.09□□□□□ -0.31
SEC23A-201ENST00000307712 SHQ1Q6PI26 577 aaKnown RBP13.09□□□□□ -0.31
SEC23A-201ENST00000307712 Q6ZSR9 355 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 SPATC1Q76KD6 591 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 TMPRSS11BQ86T26 416 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 LAPTM4BQ86VI4 370 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 C3orf58Q8NDZ4 430 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 C1orf74Q96LT6 269 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 MGLLQ99685 303 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 ACAT2Q9BWD1 397 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 EMILIN2Q9BXX0 1053 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 AMBRA1Q9C0C7 1298 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 TVP23BQ9NYZ1 205 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 PTGFRNQ9P2B2 879 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 IFT52Q9Y366 437 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 I6L893 689 aaPredicted RBP13.09□□□□□ -0.31
SEC23A-201ENST00000307712 TPST2O60704 377 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 CPNE6O95741 557 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 PTTG1O95997 202 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 EBLN1P0CF75 366 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 MTHFD2P13995 350 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 HNRNPFP52597 415 aaKnown RBP13.09□□□□□ -0.31
SEC23A-201ENST00000307712 TEAD4Q15561 434 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 ZNF792Q3KQV3 632 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 LCN1P1Q5VSP4 162 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 LYPLAL1Q5VWZ2 237 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 CACTIN-AS1Q8N1I8 211 aa13.09□□□□□ -0.31
SEC23A-201ENST00000307712 CYP4Z2PQ8N1L4 340 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms