RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 ERVK-10P10266 1014 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 PTGER1P34995 402 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 EFNA3P52797 238 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 GEMP55040 296 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 OC90Q02509 493 aaPredicted RBP11.19□□□□□ -0.62
SMIM4-201ENST00000307106 NFKBIBQ15653 356 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 RNFT1Q5M7Z0 435 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 PLAG1Q6DJT9 500 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 CRLF3Q8IUI8 442 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 CCDC71Q8IV32 467 aaPredicted RBP11.19□□□□□ -0.62
SMIM4-201ENST00000307106 CPSF7Q8N684 471 aaKnown RBP11.19□□□□□ -0.62
SMIM4-201ENST00000307106 AMER3Q8N944 861 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 WFDC11Q8NEX6 87 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 OR2L8Q8NGY9 312 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 NUDT8Q8WV74 236 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 RNF25Q96BH1 459 aaPredicted RBP11.19□□□□□ -0.62
SMIM4-201ENST00000307106 MVB12AQ96EY5 273 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 C19orf43Q9BQ61 176 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 GPATCH1Q9BRR8 931 aaKnown RBP11.19□□□□□ -0.62
SMIM4-201ENST00000307106 TGIF2Q9GZN2 237 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 CLEC4MQ9H2X3 399 aaPredicted RBP11.19□□□□□ -0.62
SMIM4-201ENST00000307106 KCNK13Q9HB14 408 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 MKKSQ9NPJ1 570 aaPredicted RBP11.19□□□□□ -0.62
SMIM4-201ENST00000307106 RTN4Q9NQC3 1192 aaKnown RBP11.19□□□□□ -0.62
SMIM4-201ENST00000307106 SMARCAL1Q9NZC9 954 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 UVRAGQ9P2Y5 699 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 HRH3Q9Y5N1 445 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 PRSS21Q9Y6M0 314 aa11.19□□□□□ -0.62
SMIM4-201ENST00000307106 A0A1B0GTH9 108 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 QSOX1O00391 747 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 NRP2O60462 931 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 NEURL1O76050 574 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 SUN1O94901 812 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 FKBP9O95302 570 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 KRT1P04264 644 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 HEXAP06865 529 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 PECAM1P16284 738 aaPredicted RBP11.18□□□□□ -0.62
SMIM4-201ENST00000307106 SLC26A3P40879 764 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 NR2C2P49116 596 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 CSE1LP55060 971 aaKnown RBP11.18□□□□□ -0.62
SMIM4-201ENST00000307106 PLOD1Q02809 727 aaPredicted RBP11.18□□□□□ -0.62
SMIM4-201ENST00000307106 MSLNQ13421 630 aaPredicted RBP11.18□□□□□ -0.62
SMIM4-201ENST00000307106 GRB7Q14451 532 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 DBN1Q16643 649 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 MAPKAPK3Q16644 382 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 SYT16Q17RD7 645 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 ODF2Q5BJF6 829 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 DNAJC21Q5F1R6 531 aaKnown RBP11.18□□□□□ -0.62
SMIM4-201ENST00000307106 SLC25A25Q6KCM7 469 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 ALKBH5Q6P6C2 394 aaKnown RBP11.18□□□□□ -0.62
SMIM4-201ENST00000307106 RANBP10Q6VN20 620 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 RNF44Q7L0R7 432 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 ZZZ3Q8IYH5 903 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 HORMAD2Q8N7B1 307 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 METTL21AQ8WXB1 218 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 MBD6Q96DN6 1003 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 MMABQ96EY8 250 aaPredicted RBP11.18□□□□□ -0.62
SMIM4-201ENST00000307106 DNAJC1Q96KC8 554 aaKnown RBP11.18□□□□□ -0.62
SMIM4-201ENST00000307106 NPAS2Q99743 824 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 LCMT1Q9UIC8 334 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 L3MBTL1Q9Y468 752 aa11.18□□□□□ -0.62
SMIM4-201ENST00000307106 BZW2Q9Y6E2 419 aaKnown RBP11.18□□□□□ -0.62
SMIM4-201ENST00000307106 GABRR3A8MPY1 467 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 MAN1A2O60476 641 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 ANXA9O76027 345 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 RPN2P04844 631 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 ANXA5P08758 320 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 PSMB5P28074 263 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 ADRA1AP35348 466 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 EMP3P54852 163 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 MESDQ14696 234 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 PRTGQ2VWP7 1150 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 LANCL3Q6ZV70 420 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 CPEB2Q7Z5Q1 589 aaKnown RBP11.17□□□□□ -0.62
SMIM4-201ENST00000307106 CAMKMTQ7Z624 323 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 DCUN1D3Q8IWE4 304 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 ZC3H7AQ8IWR0 971 aaKnown RBP11.17□□□□□ -0.62
SMIM4-201ENST00000307106 PIANPQ8IYJ0 282 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 RPRMLQ8N4K4 120 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 ACRBPQ8NEB7 543 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 CFAP61Q8NHU2 1237 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 SEC16BQ96JE7 1060 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 OLFM1Q99784 485 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 MIPEPQ99797 713 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 GORASP1Q9BQQ3 440 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 GBA3Q9H227 469 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 TP63Q9H3D4 680 aaPredicted RBP11.17□□□□□ -0.62
SMIM4-201ENST00000307106 CHMP5Q9NZZ3 219 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 IMPACTQ9P2X3 320 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 TRHDEQ9UKU6 1024 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 SLC39A10Q9ULF5 831 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 RUVBL1Q9Y265 456 aaKnown RBP11.17□□□□□ -0.62
SMIM4-201ENST00000307106 COL6A5A8TX70 2615 aa11.17□□□□□ -0.62
SMIM4-201ENST00000307106 CHD3Q12873 2000 aaKnown RBP11.16□□□□□ -0.62
SMIM4-201ENST00000307106 USP27XA6NNY8 438 aa11.16□□□□□ -0.62
SMIM4-201ENST00000307106 H0YGG7 62 aa11.16□□□□□ -0.62
SMIM4-201ENST00000307106 H7C0S8 307 aa11.16□□□□□ -0.62
SMIM4-201ENST00000307106 TFECO14948 347 aaPredicted RBP11.16□□□□□ -0.62
SMIM4-201ENST00000307106 NME2P1O60361 137 aa11.16□□□□□ -0.62
SMIM4-201ENST00000307106 CDC40O60508 579 aaKnown RBP eCLIP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms