RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 TMEM169Q96HH4 297 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 WDR12Q9GZL7 423 aaKnown RBP14.68□□□□□ -0.06
CSDC2-201ENST00000306149 TRIT1Q9H3H1 467 aaKnown RBP14.68□□□□□ -0.06
CSDC2-201ENST00000306149 HMG20AQ9NP66 347 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 PAIP2BQ9ULR5 123 aaKnown RBP14.68□□□□□ -0.06
CSDC2-201ENST00000306149 MYO7AQ13402 2215 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 TMEM221A6NGB7 291 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 ZNF99A8MXY4 864 aaPredicted RBP14.68□□□□□ -0.06
CSDC2-201ENST00000306149 CLIC1O00299 241 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 KPNA4O00629 521 aaPredicted RBP14.68□□□□□ -0.06
CSDC2-201ENST00000306149 YY2O15391 372 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 NDUFS2O75306 463 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 GABARAPO95166 117 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 AMD1P17707 334 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 KIR3DL1P43629 444 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 VLDLRP98155 873 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 OCA2Q04671 838 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 ACOX1Q15067 660 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 METTL2BQ6P1Q9 378 aaKnown RBP14.68□□□□□ -0.06
CSDC2-201ENST00000306149 CCDC81Q6ZN84 652 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 DPY19L3Q6ZPD9 716 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 MCOLN3Q8TDD5 553 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 ITPKCQ96DU7 683 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 SLC12A9Q9BXP2 914 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 GABARAPL1Q9H0R8 117 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 SUV39H2Q9H5I1 410 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 ARMC7Q9H6L4 198 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 PCDH12Q9NPG4 1184 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 AKIP1Q9NQ31 210 aa14.68□□□□□ -0.06
CSDC2-201ENST00000306149 MRPL17Q9NRX2 175 aaKnown RBP14.68□□□□□ -0.06
CSDC2-201ENST00000306149 M0QX08 132 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 FPGTO14772 594 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 WNT9AO14904 365 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 ALDH1A1P00352 501 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 OR56A5P0C7T3 313 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 PRPS2P11908 318 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 DGCR6Q14129 220 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 FRG2Q64ET8 278 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 SYT12Q8IV01 421 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 CHST14Q8NCH0 376 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 CMTM7Q96FZ5 175 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 FRG2BQ96QU4 278 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 KIAA1522Q9P206 1035 aaPredicted RBP14.67□□□□□ -0.06
CSDC2-201ENST00000306149 B4GALT6Q9UBX8 382 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 LSM7Q9UK45 103 aaKnown RBP14.67□□□□□ -0.06
CSDC2-201ENST00000306149 BTBD3Q9Y2F9 522 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 C5orf42Q9H799 3197 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 OR2AG2A6NM03 316 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 EVPLLA8MZ36 301 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 FKBP9O95302 570 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 C1SP09871 688 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 CD22P20273 847 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 HLA-FP30511 346 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 CLK3P49761 638 aaKnown RBP14.67□□□□□ -0.06
CSDC2-201ENST00000306149 CASP9P55211 416 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 UGT8Q16880 541 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 SHQ1Q6PI26 577 aaKnown RBP14.67□□□□□ -0.06
CSDC2-201ENST00000306149 B3GNT8Q7Z7M8 397 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 SNX29P2Q8IUI4 249 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 FAR1Q8WVX9 515 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 TBC1D20Q96BZ9 403 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 VMP1Q96GC9 406 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 BRD9Q9H8M2 597 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 RASSF1Q9NS23 344 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 PLXNB3Q9ULL4 1909 aa14.67□□□□□ -0.06
CSDC2-201ENST00000306149 MICAL3Q7RTP6 2002 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 PABPN1LA6NDY0 278 aaKnown RBP14.66□□□□□ -0.06
CSDC2-201ENST00000306149 TMEM202A6NGA9 273 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 KCNK5O95279 499 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 NUDT7P0C024 238 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 CBSLP0DN79 551 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 AQP1P29972 269 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 CBSP35520 551 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 MAGEA2P43356 314 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 MAPK8P45983 427 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 SLC6A12P48065 614 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 GSSP48637 474 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 SNRPD1P62314 119 aaKnown RBP14.66□□□□□ -0.06
CSDC2-201ENST00000306149 OXA1LQ15070 435 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 C1QTNF12Q5T7M4 302 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 OR2T5Q6IEZ7 315 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 USP45Q70EL2 814 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 SETD9Q8NE22 299 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 OR2T29Q8NH02 315 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 ALPK1Q96QP1 1244 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 MROQ9BYG7 248 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 TRNAU1APQ9NX07 287 aaKnown RBP14.66□□□□□ -0.06
CSDC2-201ENST00000306149 PDP1Q9P0J1 537 aaPredicted RBP14.66□□□□□ -0.06
CSDC2-201ENST00000306149 SLC22A1O15245 554 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 CCNDBP1O95273 360 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 LATS1O95835 1130 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 PPP3CCP48454 512 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 ABRQ12979 859 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 GBX1Q14549 363 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 NPTX1Q15818 432 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 CYP2A13Q16696 494 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 TRIM16LQ309B1 348 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 PDE12Q6L8Q7 609 aaKnown RBP14.66□□□□□ -0.06
CSDC2-201ENST00000306149 Q6ZVU0 165 aa14.66□□□□□ -0.06
CSDC2-201ENST00000306149 LRRC70Q7Z2Q7 622 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms