RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 SLC10A3P09131 477 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 TRAPPC2P0DI81 140 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 TRAPPC2BP0DI82 140 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 UBL4AP11441 157 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 HSPA7P48741 367 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 ITGA1P56199 1179 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 CACNB2Q08289 660 aaPredicted RBP10.57□□□□□ -0.72
ZNF558-201ENST00000301475 HYAL2Q12891 473 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 IQCCQ4KMZ1 466 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 GNASQ5JWF2 1037 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 C10orf62Q5T681 223 aaPredicted RBP10.57□□□□□ -0.72
ZNF558-201ENST00000301475 DOK6Q6PKX4 331 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 AFTPHQ6ULP2 937 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 SBSNQ6UWP8 590 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 ATCAYQ86WG3 371 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 TMEM86AQ8N2M4 240 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 FATE1Q969F0 183 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 NECTIN4Q96NY8 510 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 RAD9AQ99638 391 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 BARHL1Q9BZE3 327 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 REEP1Q9H902 201 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 ASAH2Q9NR71 780 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 ABCC13Q9NSE7 274 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 TMEM184CQ9NVA4 438 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 GPRC5BQ9NZH0 403 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 DLGAP4Q9Y2H0 992 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 AP3M1Q9Y2T2 418 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 ACTL7AQ9Y615 435 aa10.57□□□□□ -0.72
ZNF558-201ENST00000301475 OTCP00480 354 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 KRT6AP02538 564 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 KRT6BP04259 564 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 BCKDHAP12694 445 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 HOXB6P17509 224 aaKnown RBP10.56□□□□□ -0.72
ZNF558-201ENST00000301475 GGT2P36268 569 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 GJA5P36382 358 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 ACVRL1P37023 503 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 GDF5P43026 501 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 OR3A3P47888 321 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 TUFMP49411 452 aaKnown RBP10.56□□□□□ -0.72
ZNF558-201ENST00000301475 CSNK2BP67870 215 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 EFR3AQ14156 821 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 NFE2Q16621 373 aaPredicted RBP10.56□□□□□ -0.72
ZNF558-201ENST00000301475 FBXO43Q4G163 708 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 SLC39A12Q504Y0 691 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 USP39Q53GS9 565 aaKnown RBP10.56□□□□□ -0.72
ZNF558-201ENST00000301475 NLRP8Q86W28 1048 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 ZSWIM9Q86XI8 627 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 LAX1Q8IWV1 398 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 IQCF2Q8IXL9 164 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 RGL4Q8IZJ4 473 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 FAM109AQ8N4B1 249 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 NATD1Q8N6N6 113 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 COQ8BQ96D53 544 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 COL21A1Q96P44 957 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 TRIB3Q96RU7 358 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 DHRS9Q9BPW9 319 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 POLR1EQ9GZS1 481 aaKnown RBP10.56□□□□□ -0.72
ZNF558-201ENST00000301475 KCNH6Q9H252 994 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 AASDHPPTQ9NRN7 309 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 ELOVL2Q9NXB9 296 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 SLC6A14Q9UN76 642 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 MAN2B2Q9Y2E5 1009 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 A0A0G2JLL6 359 aaPredicted RBP10.56□□□□□ -0.72
ZNF558-201ENST00000301475 C12orf71A8MTZ7 269 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 RGS5O15539 181 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 RGS14O43566 566 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 ZNF780AO75290 641 aaPredicted RBP10.56□□□□□ -0.72
ZNF558-201ENST00000301475 TIE1P35590 1138 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 GNPDA1P46926 289 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 ST3GAL4Q11206 333 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 TSTQ16762 297 aaKnown RBP10.56□□□□□ -0.72
ZNF558-201ENST00000301475 PTCHD3Q3KNS1 767 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 PAN2Q504Q3 1202 aaKnown RBP10.56□□□□□ -0.72
ZNF558-201ENST00000301475 CACHD1Q5VU97 1274 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 PRRT2Q7Z6L0 340 aaPredicted RBP10.56□□□□□ -0.72
ZNF558-201ENST00000301475 FAM124AQ86V42 546 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 CCDC28AQ8IWP9 274 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 TMEM132CQ8N3T6 1108 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 ST13P5Q8NFI4 369 aaPredicted RBP10.56□□□□□ -0.72
ZNF558-201ENST00000301475 MDGA1Q8NFP4 955 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 DNAJB3Q8WWF6 145 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 SNAPC3Q92966 411 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 CEP295NLQ96MC4 621 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 DPH2Q9BQC3 489 aaPredicted RBP10.56□□□□□ -0.72
ZNF558-201ENST00000301475 LRTM1Q9HBL6 345 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 TMEM248Q9NWD8 314 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 TOR4AQ9NXH8 423 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 RIMKLBQ9ULI2 386 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 PPT2Q9UMR5 302 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 KLK4Q9Y5K2 254 aa10.56□□□□□ -0.72
ZNF558-201ENST00000301475 HAS3O00219 553 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 TAPBPO15533 448 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 GPX5O75715 221 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 GUCA1CO95843 209 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 C9P02748 559 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 RHOQP17081 205 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 RPS5P46782 204 aaKnown RBP10.55□□□□□ -0.72
ZNF558-201ENST00000301475 IDH2P48735 452 aaKnown RBP10.55□□□□□ -0.72
ZNF558-201ENST00000301475 TGM4P49221 684 aa10.55□□□□□ -0.72
ZNF558-201ENST00000301475 FAM189BP81408 668 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms