RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 EPOP01588 193 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 C9P02748 559 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 STSP08842 583 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 PKMP14618 531 aaKnown RBP13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 CD72P21854 359 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 MLLT3P42568 568 aaPredicted RBP13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 MLLT6P55198 1093 aaPredicted RBP13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 ZNF79Q15937 498 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 BAK1Q16611 211 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 CTSL3PQ5NE16 218 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 TAPT1Q6NXT6 567 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 Q6ZPB1 254 aaPredicted RBP13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 ADAMTSL2Q86TH1 951 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 OR5H6Q8NGV6 325 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 ASB15Q8WXK1 588 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 EMID1Q96A84 441 aaPredicted RBP13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 SEMA3CQ99985 751 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 PRDM5Q9NQX1 630 aaPredicted RBP13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 OLA1Q9NTK5 396 aaKnown RBP13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 GPR83Q9NYM4 423 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 NUFIP1Q9UHK0 495 aaKnown RBP13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 SNX8Q9Y5X2 465 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 DPM1O60762 260 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 HMGCS1Q01581 520 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 TEKQ02763 1124 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 HYAL2Q12891 473 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 TARDBPQ13148 414 aaKnown RBP eCLIP13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 SLC14A1Q13336 389 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 TIMM50Q3ZCQ8 353 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 USP39Q53GS9 565 aaKnown RBP13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 GNASQ5JWF2 1037 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 C10orf62Q5T681 223 aaPredicted RBP13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 GPR153Q6NV75 609 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 ZNF367Q7RTV3 350 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 VTCN1Q7Z7D3 282 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 ATCAYQ86WG3 371 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 ZNF683Q8IZ20 524 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 SCAMP5Q8TAC9 235 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 CRELD1Q96HD1 420 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 INPP5KQ9BT40 448 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 MRPL9Q9BYD2 267 aaKnown RBP13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 SRRQ9GZT4 340 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 MMP28Q9H239 520 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 TXNRD2Q9NNW7 524 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 ATP13A2Q9NQ11 1180 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 ABCC13Q9NSE7 274 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 MIOSQ9NXC5 875 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 TOR4AQ9NXH8 423 aa13.12□□□□□ -0.31
RPUSD4-201ENST00000298317 SLC28A1O00337 649 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 ALPPP05187 535 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 GNPDA1P46926 289 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 PGFP49763 221 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 CDC42EP1Q00587 391 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 BNC1Q01954 994 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 EIF4HQ15056 248 aaKnown RBP13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 ZMAT1Q5H9K5 638 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 SYCE2Q6PIF2 218 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 MILR1Q7Z6M3 343 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 SERPINA11Q86U17 422 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 RNF130Q86XS8 419 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 TMEM40Q8WWA1 233 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 CITED4Q96RK1 184 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 ZNF717Q9BY31 904 aaPredicted RBP13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 IPPKQ9H8X2 491 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 TMEM248Q9NWD8 314 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 ZMYM5Q9UJ78 669 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 RPS6KA6Q9UK32 745 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 KLHL20Q9Y2M5 609 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 BRWD3Q6RI45 1802 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 TFECO14948 347 aaPredicted RBP13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 RHOQP17081 205 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 GABRB1P18505 474 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 ERP29P30040 261 aaKnown RBP13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 PTGS2P35354 604 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 CDKN2CP42773 168 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 CDKN1CP49918 316 aaPredicted RBP13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 IQCCQ4KMZ1 466 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 TRIM46Q7Z4K8 759 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 TCTE3Q8IZS6 198 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 RDH10Q8IZV5 341 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 STX19Q8N4C7 294 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 CLHC1Q8NHS4 586 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 HSH2DQ96JZ2 352 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 WDFY2Q96P53 400 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 KCNC2Q96PR1 638 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 EPYCQ99645 322 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 POLR1EQ9GZS1 481 aaKnown RBP13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 LRTM1Q9HBL6 345 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 DIABLOQ9NR28 239 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 RAD18Q9NS91 495 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 MICAL3Q7RTP6 2002 aa13.11□□□□□ -0.31
RPUSD4-201ENST00000298317 A0A0B4J293 547 aa13.1□□□□□ -0.31
RPUSD4-201ENST00000298317 A0A1W2PQ09 198 aa13.1□□□□□ -0.31
RPUSD4-201ENST00000298317 SLC35F4A4IF30 521 aa13.1□□□□□ -0.31
RPUSD4-201ENST00000298317 CYP7B1O75881 506 aa13.1□□□□□ -0.31
RPUSD4-201ENST00000298317 PRKACAP17612 351 aa13.1□□□□□ -0.31
RPUSD4-201ENST00000298317 PBX3P40426 434 aa13.1□□□□□ -0.31
RPUSD4-201ENST00000298317 NUDT6P53370 316 aa13.1□□□□□ -0.31
RPUSD4-201ENST00000298317 B2MP61769 119 aa13.1□□□□□ -0.31
RPUSD4-201ENST00000298317 FAPQ12884 760 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms