RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 GNGT2O14610 69 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 DEAF1O75398 565 aaPredicted RBP11.39□□□□□ -0.59
RHO-201ENST00000296271 PSIP1O75475 530 aaKnown RBP11.39□□□□□ -0.59
RHO-201ENST00000296271 GMNNO75496 209 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 NTRK1P04629 796 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 ABCB1P08183 1280 aaPredicted RBP11.39□□□□□ -0.59
RHO-201ENST00000296271 ADH5P11766 374 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 ENGP17813 658 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 AGXTP21549 392 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 MAP4P27816 1152 aaKnown RBP11.39□□□□□ -0.59
RHO-201ENST00000296271 NNMTP40261 264 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 HNMTP50135 292 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 VAC14Q08AM6 782 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 FOXD4Q12950 439 aaPredicted RBP11.39□□□□□ -0.59
RHO-201ENST00000296271 LRIF1Q5T3J3 769 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 CEP68Q76N32 757 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 DPPA4Q7L190 304 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 TMPRSS11BQ86T26 416 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 TRAPPC5Q8IUR0 188 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 RASGRP3Q8IV61 690 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 CHPFQ8IZ52 775 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 MMP21Q8N119 569 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 CCDC115Q96NT0 180 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 PANX1Q96RD7 426 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 RAD9AQ99638 391 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 NPLQ9BXD5 320 aaPredicted RBP11.39□□□□□ -0.59
RHO-201ENST00000296271 SGK2Q9HBY8 427 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 DCAF13Q9NV06 445 aaKnown RBP11.39□□□□□ -0.59
RHO-201ENST00000296271 PADI4Q9UM07 663 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 A0A096LPI6 279 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 SLC5A10A0PJK1 596 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 FPGTO14772 594 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 EFCAB14O75071 495 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 RECQL5O94762 991 aaPredicted RBP11.39□□□□□ -0.59
RHO-201ENST00000296271 ALBP02768 609 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 THRBP10828 461 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 COX7A2P14406 83 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 ALDH3A2P51648 485 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 MC1RQ01726 317 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 STARD3Q14849 445 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 MEP1AQ16819 746 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 CTU2Q2VPK5 515 aaKnown RBP11.39□□□□□ -0.59
RHO-201ENST00000296271 GGTA1PQ4G0N0 100 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 PDE12Q6L8Q7 609 aaKnown RBP11.39□□□□□ -0.59
RHO-201ENST00000296271 FAM43BQ6ZT52 329 aaPredicted RBP11.39□□□□□ -0.59
RHO-201ENST00000296271 PATL1Q86TB9 770 aaKnown RBP11.39□□□□□ -0.59
RHO-201ENST00000296271 ZNF547Q8IVP9 402 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 GPR65Q8IYL9 337 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 PLA2G15Q8NCC3 412 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 HUS1BQ8NHY5 278 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 ZNF480Q8WV37 535 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 FBXL8Q96CD0 374 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 HAUS8Q9BT25 410 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 ZSCAN5AQ9BUG6 496 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 ACAT2Q9BWD1 397 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 TM7SF3Q9NS93 570 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 PTTG2Q9NZH5 202 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 IFT80Q9P2H3 777 aaPredicted RBP11.39□□□□□ -0.59
RHO-201ENST00000296271 VPS29Q9UBQ0 182 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 PCDHGA8Q9Y5G5 932 aa11.39□□□□□ -0.59
RHO-201ENST00000296271 CFAP20Q9Y6A4 193 aaKnown RBP11.39□□□□□ -0.59
RHO-201ENST00000296271 GABRR3A8MPY1 467 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 FTH1P02794 183 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 CYP4B1P13584 511 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 ACPPP15309 386 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 WASP42768 502 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 KIR3DL1P43629 444 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 RPS13P62277 151 aaKnown RBP11.38□□□□□ -0.59
RHO-201ENST00000296271 NFE2L1Q14494 772 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 GAB4Q2WGN9 574 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 ABRAXAS1Q6UWZ7 409 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 ZNF852Q6ZMS4 543 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 FAM83HQ6ZRV2 1179 aaPredicted RBP11.38□□□□□ -0.59
RHO-201ENST00000296271 KCTD8Q6ZWB6 473 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 GPR149Q86SP6 731 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 ZDHHC13Q8IUH4 622 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 SYTL1Q8IYJ3 562 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 OR7G3Q8NG95 312 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 OR4K1Q8NGD4 311 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 CCM2Q9BSQ5 444 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 SORBS1Q9BX66 1292 aaKnown RBP11.38□□□□□ -0.59
RHO-201ENST00000296271 POLR1BQ9H9Y6 1135 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 TMEM45AQ9NWC5 275 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 NDUFA13Q9P0J0 144 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 KLHL42Q9P2K6 505 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 TBC1D14Q9P2M4 693 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 RSL24D1Q9UHA3 163 aaKnown RBP11.38□□□□□ -0.59
RHO-201ENST00000296271 EXO1Q9UQ84 846 aaKnown RBP11.38□□□□□ -0.59
RHO-201ENST00000296271 PLXND1Q9Y4D7 1925 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 CLIC1O00299 241 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 WNT9AO14904 365 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 HS6ST1O60243 411 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 ATG13O75143 517 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 TGFB1P01137 390 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 EEF1B2P24534 225 aaKnown RBP11.38□□□□□ -0.59
RHO-201ENST00000296271 DCTP40126 519 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 NRIP1P48552 1158 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 PRLHRP49683 370 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 AP1S2P56377 157 aa11.38□□□□□ -0.59
RHO-201ENST00000296271 IL1RL1Q01638 556 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms